RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 NIPAL1Q6NVV3 410 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 RNF175Q8N4F7 328 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 L3MBTL4Q8NA19 623 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 GAL3ST3Q96A11 431 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 FAR2Q96K12 515 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 CDK15Q96Q40 435 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 NTMT1Q9BV86 223 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 REXO4Q9GZR2 422 aaKnown RBP14.83□□□□□ -0.04
NCBP3-207ENST00000577169 PRM3Q9NNZ6 103 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 SEMA4BQ9NPR2 832 aaPredicted RBP14.83□□□□□ -0.04
NCBP3-207ENST00000577169 TUBD1Q9UJT1 453 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 EMCNQ9ULC0 261 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 GRID1Q9ULK0 1009 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 PLAAQ9Y263 795 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 SCN2AQ99250 2005 aa14.83□□□□□ -0.04
NCBP3-207ENST00000577169 K7EM74 188 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 PPP6CO00743 305 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ERI3O43414 337 aaKnown RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 UGDHO60701 494 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 SH3BGRLO75368 114 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 CLDN9O95484 217 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 RPS17P08708 135 aaKnown RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 KRT4P19013 534 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 TSPAN8P19075 237 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 IMPDH1P20839 514 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ATP5F1P24539 256 aaPredicted RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 CRHR1P34998 444 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ARL1P40616 181 aaPredicted RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 CCNG1P51959 295 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 PLA2G16P53816 162 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 SKP1P63208 163 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 SLC18A2Q05940 514 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 RUNX2Q13950 521 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 CPSF6Q16630 551 aaKnown RBP eCLIP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 UNC50Q53HI1 259 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 DCAF10Q5QP82 559 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 MILR1Q7Z6M3 343 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 C4orf33Q8N1A6 199 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 RIBC1Q8N443 379 aaPredicted RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 OR2L5Q8NG80 312 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 OR11G2Q8NGC1 345 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 OR52B6Q8NGF0 335 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ZNF483Q8TF39 744 aaPredicted RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 C8orf44Q96CB5 159 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 MTFMTQ96DP5 389 aaKnown RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 QRFPRQ96P65 431 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 C1QTNF3Q9BXJ4 246 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 MS4A8Q9BY19 250 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 VN1R1Q9GZP7 353 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 SLC25A18Q9H1K4 315 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 C12orf65Q9H3J6 166 aaKnown RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 CLK4Q9HAZ1 481 aaKnown RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ATP13A2Q9NQ11 1180 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 PRDM7Q9NQW5 492 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ZNF71Q9NQZ8 489 aaPredicted RBP14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ADGRE2Q9UHX3 823 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 FBXL4Q9UKA2 621 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 PCDHGA11Q9Y5H2 935 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 MGAQ8IWI9 3026 aa14.82□□□□□ -0.04
NCBP3-207ENST00000577169 ITPR1Q14643 2758 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 CFAP47Q6ZTR5 3102 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 FAM227AF5H4B4 570 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 H0YIV9 168 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 COPEO14579 308 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 ALOX12BO75342 701 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 SUPT7LO94864 414 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 PROCP04070 461 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 IL10P22301 178 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 HPDP32754 393 aaPredicted RBP14.81□□□□□ -0.04
NCBP3-207ENST00000577169 PRKAA2P54646 552 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 HERVK_113P63132 956 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 DDX39BQ13838 428 aaKnown RBP14.81□□□□□ -0.04
NCBP3-207ENST00000577169 ZRSR2Q15696 482 aaKnown RBP14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TUBB8Q3ZCM7 444 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 MINDY4Q4G0A6 757 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 ZNF678Q5SXM1 525 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 DEPDC1Q5TB30 811 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TRIM40Q6P9F5 258 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 ABHD17CQ6PCB6 329 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TMEM205Q6UW68 189 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 CHSY3Q70JA7 882 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 UBE3DQ7Z6J8 389 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TRABD2AQ86V40 505 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 SLC22A9Q8IVM8 553 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 CA13Q8N1Q1 262 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 HUS1BQ8NHY5 278 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 C9orf43Q8TAL5 461 aaPredicted RBP14.81□□□□□ -0.04
NCBP3-207ENST00000577169 PPP4R1Q8TF05 950 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TBC1D20Q96BZ9 403 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 CMTM7Q96FZ5 175 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 VPS50Q96JG6 964 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 MTERF1Q99551 399 aaKnown RBP14.81□□□□□ -0.04
NCBP3-207ENST00000577169 SLC25A23Q9BV35 468 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TMEM109Q9BVC6 243 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 ERVK-6Q9BXR3 956 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 RBCK1Q9BYM8 510 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 OR51B5Q9H339 312 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 LANCL2Q9NS86 450 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 LGALS13Q9UHV8 139 aa14.81□□□□□ -0.04
NCBP3-207ENST00000577169 TSC22D4Q9Y3Q8 395 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms