RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 GRPEL2Q8TAA5 225 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 GTF2H4Q92759 462 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 DOHHQ9BU89 302 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 NUFIP1Q9UHK0 495 aaKnown RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CORINQ9Y5Q5 1042 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 RPS3P23396 243 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 TLX1P31314 330 aaPredicted RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 NCBP2P52298 156 aaKnown RBP eCLIP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 RAB8AP61006 207 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 SPHARQ15513 63 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 COQ5Q5HYK3 327 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM180AQ6UWF9 173 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 Q6ZNX1 250 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 RASSF6Q6ZTQ3 369 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 TSPYL5Q86VY4 417 aaPredicted RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IQCF1Q8N6M8 205 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 SORCS1Q8WY21 1168 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 CRELD1Q96HD1 420 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ZBED3Q96IU2 234 aaPredicted RBP17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 ZNF583Q96ND8 569 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 HDHD5Q9BXW7 423 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 IGFLR1Q9H665 355 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 PCDHA9Q9Y5H5 950 aa17.25■□□□□ 0.35
ATPAF1-214ENST00000576409 A0A1B0GTL3 188 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 AREL1O15033 823 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 TSPAN6O43657 245 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 OR6A2O95222 327 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 NUDT7P0C024 238 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 SBK3P0C264 359 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 ETV3P41162 512 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 HNMTP50135 292 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 DPY19L3Q6ZPD9 716 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 METTL3Q86U44 580 aaKnown RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 APCDD1Q8J025 514 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 NLGN4XQ8N0W4 816 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 TSSK6Q9BXA6 273 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 GSDMCQ9BYG8 508 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 IL26Q9NPH9 171 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 CCDC59Q9P031 241 aaKnown RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 PCDH10Q9P2E7 1040 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 PCDHGB6Q9Y5F9 930 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 SMAD9O15198 467 aaKnown RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 SMAD6O43541 496 aaKnown RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 DYRK3O43781 588 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 RB1P06400 928 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 HMGCLP35914 325 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 RTP2Q5QGT7 225 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 NPAS4Q8IUM7 802 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 SNX33Q8WV41 574 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 CCM2Q9BSQ5 444 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 UTS2RQ9UKP6 389 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 ERVK-11Q9UQG0 969 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 A0A075B6Q4 140 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 DAPL1A0PJW8 107 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 EPHX1P07099 455 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 DCKP27707 260 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 OXR1Q8N573 874 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 PIGXQ8TBF5 258 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 BPIFB1Q8TDL5 484 aa17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 ZBED6CLQ96FA7 236 aaPredicted RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 DCAF13Q9NV06 445 aaKnown RBP17.24■□□□□ 0.35
ATPAF1-214ENST00000576409 AP1G1O43747 822 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 BPIP17213 487 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 CRHR2Q13324 411 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 GNA13Q14344 377 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 PELI3Q8N2H9 469 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 PDCD10Q9BUL8 212 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 TTYH1Q9H313 450 aaPredicted RBP17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 NLKQ9UBE8 527 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 SPAG17Q6Q759 2223 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 UBE2QL1A1L167 161 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 ISPDA4D126 451 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 MID1O15344 667 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 PI15O43692 258 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 STC2O76061 302 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 BMP4P12644 408 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 CA5AP35218 305 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 SOX3P41225 446 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 GPR68Q15743 365 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 BTBD16Q32M84 506 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 CARD16Q5EG05 197 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 TMIGD1Q6UXZ0 262 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 FAM46DQ8NEK8 389 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 IFT27Q9BW83 186 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 MTG2Q9H4K7 406 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 TAS2R16Q9NYV7 291 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 HCSTQ9UBK5 93 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 GPR52Q9Y2T5 361 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 GLTPD2A6NH11 291 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 POP7O75817 140 aaKnown RBP17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 C8AP07357 584 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 CD40LGP29965 261 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 NKX3-2P78367 333 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 RHAGQ02094 409 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 SPATS1Q496A3 300 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 GDPD4Q6W3E5 623 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 MYLIPQ8WY64 445 aa17.23■□□□□ 0.35
ATPAF1-214ENST00000576409 MAN2B2Q9Y2E5 1009 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms