RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LRRC40Q9H9A6 602 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 LANCL2Q9NS86 450 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 DEPPQ9NTK1 212 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 RUVBL2Q9Y230 463 aaKnown RBP5.47□□□□□ -1.53
SMG6-219ENST00000575663 YARS2Q9Y2Z4 477 aaKnown RBP5.47□□□□□ -1.53
SMG6-219ENST00000575663 NAALAD2Q9Y3Q0 740 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 ATRQ13535 2644 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 NBEAL1Q6ZS30 2694 aa5.47□□□□□ -1.53
SMG6-219ENST00000575663 hCG_1818297A0A087WSY0 165 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 CCDC162PA2VCL2 907 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SH3D21A4FU49 640 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 PINLYPA6NC86 204 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 MBD3L4A6NDZ8 208 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 ZNF860A6NHJ4 632 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 MBD3L5A6NJ08 208 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 APOC4-APOC2K7ER74 178 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SMAPO00193 183 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 PSMD12O00232 456 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 PSTPIP1O43586 416 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 TLX2O43763 284 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 ERN1O75460 977 aaKnown RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 MYO1DO94832 1006 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 GOT2P00505 430 aaKnown RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 APOC2P02655 101 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 STATHP02808 62 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 CATP04040 527 aaKnown RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 P04436 131 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 TMEM253P0C7T8 217 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 TIMP3P35625 211 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 GRK3P35626 688 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 CPA2P48052 419 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 NR0B1P51843 470 aaKnown RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 GTF3C1Q12789 2109 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 TBX2Q13207 712 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 SPARCL1Q14515 664 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SLC10A1Q14973 349 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 TERF2Q15554 542 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 PHKG1Q16816 387 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 ACSF3Q4G176 576 aaPredicted RBP5.46□□□□□ -1.54
SMG6-219ENST00000575663 IL20RBQ6UXL0 311 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 RTL4Q6ZR62 310 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 ASPGQ86U10 573 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 PM20D2Q8IYS1 436 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 MEIOBQ8N635 442 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 APCDD1LQ8NCL9 501 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 NAXEQ8NCW5 288 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 B3GNT7Q8NFL0 401 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 OR4L1Q8NH43 312 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 VMP1Q96GC9 406 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 PTCHD1Q96NR3 888 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 CNPPD1Q9BV87 410 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 GSX2Q9BZM3 304 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 UBTD1Q9HAC8 227 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SACM1LQ9NTJ5 587 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 ABCF3Q9NUQ8 709 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SPRR3Q9UBC9 169 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 NDRG3Q9UGV2 375 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 ZKSCAN5Q9Y2L8 839 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 SLC22A7Q9Y694 548 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 AKAP6Q13023 2319 aa5.46□□□□□ -1.54
SMG6-219ENST00000575663 KCNE1BA0A087WTH5 132 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 A0A0G2JMM0 328 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 A0A1W2PPB8 328 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 A0A1W2PPR1 153 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 A0A1W2PRS3 328 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 TCRBV16S1A1N1A0A5B0 115 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SYNDIG1LA6NDD5 238 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 GOLGA6L9A6NEM1 432 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 MROH6A6NGR9 719 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 A8MUA0 341 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 KIR3DP1A8MWS1 328 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 AHRRA9YTQ3 701 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ESPNB1AK53 854 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 AKR1B15C9JRZ8 316 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 G3V3Y1 287 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 MYO1CO00159 1063 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 NDUFS4O43181 175 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 B4GALT2O60909 372 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 AVILO75366 819 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ZFAND5O76080 213 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 OR6B1O95007 311 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 EPPINO95925 133 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CELA3AP09093 270 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 NID1P14543 1247 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CHRM3P20309 590 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ENDOUP21128 410 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 MAOAP21397 527 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CNR1P21554 472 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 PSMA3P25788 255 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ATP5DP30049 168 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 CEACAM8P31997 349 aaPredicted RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 OPRM1P35372 400 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 PTH2RP49190 550 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 TTPAP49638 278 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ZNF136P52737 540 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SNRPNP63162 240 aaKnown RBP5.45□□□□□ -1.54
SMG6-219ENST00000575663 RUNX1T1Q06455 604 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 ACKR1Q16570 336 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 SLC18A3Q16572 532 aa5.45□□□□□ -1.54
SMG6-219ENST00000575663 HYAL4Q2M3T9 481 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms