RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 CDH1P12830 882 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ALOX12P18054 663 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 MAOAP21397 527 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ACVR2AP27037 513 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 GRK3P35626 688 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ZFP36L2P47974 494 aaKnown RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 GPR143P51810 404 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 GPR85P60893 370 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 OLR1P78380 273 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 PWP1Q13610 501 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 RTL6Q6ICC9 239 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 NIPAL1Q6NVV3 410 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ARSKQ6UWY0 536 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 C4orf22Q6V702 233 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 RAD9BQ6WBX8 426 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 STRA8Q7Z7C7 330 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 C17orf64Q86WR6 236 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 SLC13A5Q86YT5 568 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 TMEM156Q8N614 296 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ACRBPQ8NEB7 543 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ABHD11Q8NFV4 315 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 OR5M3Q8NGP4 307 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 CD200R1Q8TD46 325 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 SGPP1Q9BX95 441 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 CLK4Q9HAZ1 481 aaKnown RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 TIMMDC1Q9NPL8 285 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 NECTIN3Q9NQS3 549 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 RASSF1Q9NS23 344 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 ZNF223Q9UK11 482 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 PPIEQ9UNP9 301 aaKnown RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 FAM215AQ9Y5M1 114 aa9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO2-227ENST00000575560 DNAJC13O75165 2243 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ZNF407Q9C0G0 2248 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 A0A0G2JNJ9 132 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 A0A1B0GVC2 190 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 PINLYPA6NC86 204 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 OR14I1A6ND48 311 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 A8MUA0 341 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 EIF3FO00303 357 aaPredicted RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 NDUFS4O43181 175 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CEP104O60308 925 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 TUBB4AP04350 444 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 SMIM10L1P0DMW3 83 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CCND1P24385 295 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 DNASE1P24855 282 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CLCN2P51788 898 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 PPIAP62937 165 aaKnown RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 SKP1P63208 163 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CDK16Q00536 496 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 TERF2Q15554 542 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CCNG2Q16589 344 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ARMC3Q5W041 872 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 AGTRAPQ6RW13 159 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 LCTLQ6UWM7 567 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 RGS9BPQ6ZS82 235 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 PIWIL4Q7Z3Z4 852 aaKnown RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ZZZ3Q8IYH5 903 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CPNE9Q8IYJ1 553 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 PSD4Q8NDX1 1056 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 B3GNT7Q8NFL0 401 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 OR5M9Q8NGP3 310 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 OR10Q1Q8NGQ4 319 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CREB3L4Q8TEY5 395 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 SMIM10Q96HG1 83 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 GPR21Q99679 349 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 GPATCH1Q9BRR8 931 aaKnown RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 TSGA10Q9BZW7 698 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ATG10Q9H0Y0 220 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 CLEC4MQ9H2X3 399 aaPredicted RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 KCMF1Q9P0J7 381 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ZFATQ9P243 1243 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 Q9UFV3 132 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 ADAMTS6Q9UKP5 1117 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 PDE10AQ9Y233 779 aa9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 YARS2Q9Y2Z4 477 aaKnown RBP9.28□□□□□ -0.92
CALCOCO2-227ENST00000575560 TRBV11-1A0A0K0K1C0 115 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 TCRBV7S3A2A0A539 114 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 TRBC2A0A5B9 178 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 BCKDKO14874 412 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 OR1F1O43749 312 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 AVILO75366 819 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 GLSO94925 669 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 IGHG3P01860 377 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 F7P08709 466 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 PAMP19021 973 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 TPSB2P20231 275 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 ADH7P40394 386 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 KIR2DL3P43628 341 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 SSR4P51571 173 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 CCR8P51685 355 aa9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 BASP1P80723 227 aaKnown RBP9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 TIAL1Q01085 375 aaKnown RBP eCLIP9.27□□□□□ -0.93
CALCOCO2-227ENST00000575560 LTBQ06643 244 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms