RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MPPE1Q53F39 396 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SPIN4Q56A73 249 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 GCNT6Q5T4J0 391 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.02□□□□□ -0.01
NUP88-207ENST00000573584 DPY19L3Q6ZPD9 716 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SLC43A3Q8NBI5 491 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 NFKBIDQ8NI38 313 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 IGSF21Q96ID5 467 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 SLC35A5Q9BS91 424 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 NUAK2Q9H093 628 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 RNF186Q9NXI6 227 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 CFAP97Q9P2B7 532 aa15.02□□□□□ -0.01
NUP88-207ENST00000573584 STOX2Q9P2F5 926 aaPredicted RBP15.02□□□□□ -0.01
NUP88-207ENST00000573584 PCDH17O14917 1159 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 KMOO15229 486 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 CKMP06732 381 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 CASP3P42574 277 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 NR4A2P43354 598 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 EPHB3P54753 998 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 SREBF2Q12772 1141 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 PTGES3Q15185 160 aaKnown RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 ZNF385BQ569K4 471 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 ZNF648Q5T619 568 aaPredicted RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 C22orf39Q6P5X5 142 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 ZNF367Q7RTV3 350 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 OR5M11Q96RB7 305 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 ZIC5Q96T25 663 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 MGLLQ99685 303 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 KLHL3Q9UH77 587 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 EXO1Q9UQ84 846 aaKnown RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 SNX8Q9Y5X2 465 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 CFAP20Q9Y6A4 193 aaKnown RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 SGTAO43765 313 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 APOA1P02647 267 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 TIA1P31483 386 aaKnown RBP eCLIP15.01□□□□□ -0.01
NUP88-207ENST00000573584 CDC42P60953 191 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 RPS13P62277 151 aaKnown RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 C1QTNF12Q5T7M4 302 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 THSD1Q9NS62 852 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 OGDHLQ9ULD0 1010 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 MN1Q10571 1320 aaPredicted RBP15.01□□□□□ -0.01
NUP88-207ENST00000573584 ANAPC1Q9H1A4 1944 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 PLXNB3Q9ULL4 1909 aa15.01□□□□□ -0.01
NUP88-207ENST00000573584 ZW10O43264 779 aa15□□□□□ -0.01
NUP88-207ENST00000573584 C6orf47O95873 294 aa15□□□□□ -0.01
NUP88-207ENST00000573584 OLFM2O95897 454 aa15□□□□□ -0.01
NUP88-207ENST00000573584 GBAP04062 536 aa15□□□□□ -0.01
NUP88-207ENST00000573584 LRRC74AQ0VAA2 488 aa15□□□□□ -0.01
NUP88-207ENST00000573584 TP53BP2Q13625 1128 aa15□□□□□ -0.01
NUP88-207ENST00000573584 TSTQ16762 297 aaKnown RBP15□□□□□ -0.01
NUP88-207ENST00000573584 MPP7Q5T2T1 576 aa15□□□□□ -0.01
NUP88-207ENST00000573584 RASGRP3Q8IV61 690 aa15□□□□□ -0.01
NUP88-207ENST00000573584 CLIP4Q8N3C7 705 aa15□□□□□ -0.01
NUP88-207ENST00000573584 C9orf43Q8TAL5 461 aaPredicted RBP15□□□□□ -0.01
NUP88-207ENST00000573584 CAPSLQ8WWF8 208 aa15□□□□□ -0.01
NUP88-207ENST00000573584 FAM129BQ96TA1 746 aa15□□□□□ -0.01
NUP88-207ENST00000573584 KCNS3Q9BQ31 491 aa15□□□□□ -0.01
NUP88-207ENST00000573584 BHLHE41Q9C0J9 482 aaPredicted RBP15□□□□□ -0.01
NUP88-207ENST00000573584 FAM83DQ9H4H8 585 aa15□□□□□ -0.01
NUP88-207ENST00000573584 ACER3Q9NUN7 267 aa15□□□□□ -0.01
NUP88-207ENST00000573584 HCN4Q9Y3Q4 1203 aa15□□□□□ -0.01
NUP88-207ENST00000573584 EFCAB10A6NFE3 127 aa15□□□□□ -0.01
NUP88-207ENST00000573584 PSIP1O75475 530 aaKnown RBP15□□□□□ -0.01
NUP88-207ENST00000573584 SNX4O95219 450 aa15□□□□□ -0.01
NUP88-207ENST00000573584 POP4O95707 220 aaKnown RBP15□□□□□ -0.01
NUP88-207ENST00000573584 SLC16A8O95907 504 aa15□□□□□ -0.01
NUP88-207ENST00000573584 SYTL3Q4VX76 610 aa15□□□□□ -0.01
NUP88-207ENST00000573584 SPATC1Q76KD6 591 aa15□□□□□ -0.01
NUP88-207ENST00000573584 CMTM8Q8IZV2 173 aa15□□□□□ -0.01
NUP88-207ENST00000573584 NLGN4XQ8N0W4 816 aa15□□□□□ -0.01
NUP88-207ENST00000573584 OR52N2Q8NGI0 321 aa15□□□□□ -0.01
NUP88-207ENST00000573584 CDCA4Q9BXL8 241 aa15□□□□□ -0.01
NUP88-207ENST00000573584 CPEB1Q9BZB8 566 aaKnown RBP15□□□□□ -0.01
NUP88-207ENST00000573584 REEP4Q9H6H4 257 aa15□□□□□ -0.01
NUP88-207ENST00000573584 ACSL6Q9UKU0 697 aa15□□□□□ -0.01
NUP88-207ENST00000573584 CFL2Q9Y281 166 aa15□□□□□ -0.01
NUP88-207ENST00000573584 A8MVJ9 347 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CTDSP2O14595 271 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PREPP48147 710 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CYP4F8P98187 520 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 RBBP4Q09028 425 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 GANABQ14697 944 aaKnown RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 TIMM50Q3ZCQ8 353 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PTCHD4Q6ZW05 846 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 CELF2-AS1Q8N7Q2 184 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 Q8N9G6 341 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 CEP19Q96LK0 163 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 YME1L1Q96TA2 773 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PIP5K1AQ99755 562 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 YIPF2Q9BWQ6 316 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 IL21Q9HBE4 155 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 MOV10Q9HCE1 1003 aaKnown RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 MAP4K5Q9Y4K4 846 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 TET1Q8NFU7 2136 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 LOC110117498-PIK3R3F6TDL0 507 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ADRA2AP08913 450 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 ZNF8P17098 575 aaPredicted RBP14.99□□□□□ -0.01
NUP88-207ENST00000573584 ETV6P41212 452 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 PIK3CBP42338 1070 aa14.99□□□□□ -0.01
NUP88-207ENST00000573584 BDKRB1P46663 353 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms