RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 BOD1L1Q8NFC6 3051 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 IDSB3KWA1 339 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 H0YIG0 161 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 CDC7O00311 574 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 FFAR3O14843 346 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 GPR42O15529 346 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 P2RX6O15547 441 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 OR1F1O43749 312 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 ALOX12BO75342 701 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 VPS4BO75351 444 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 PIAS1O75925 651 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 SORBS2O94875 1100 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 NSA2O95478 260 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 STATHP02808 62 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 HEXBP07686 556 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 GSTA2P09210 222 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 CDH1P12830 882 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 ZNF37AP17032 561 aaPredicted RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 CCR8P51685 355 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 SLC12A2P55011 1212 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 MAT1AQ00266 395 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 POU4F1Q01851 419 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 CSHL1Q14406 222 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 INPP5JQ15735 1006 aaPredicted RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 SYT16Q17RD7 645 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 PLEKHN1Q494U1 663 aaPredicted RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 AGAP7PQ5VUJ5 663 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 IRAK1BP1Q5VVH5 260 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 SLC6A19Q695T7 634 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 SBSNQ6UWP8 590 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 NDUFAF7Q7L592 441 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 VN1R4Q7Z5H5 301 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 ASPGQ86U10 573 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 THOC6Q86W42 341 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 CEP97Q8IW35 865 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 AMER3Q8N944 861 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 ABHD11Q8NFV4 315 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 OR4K1Q8NGD4 311 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 OR9A4Q8NGU2 314 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 TM9SF4Q92544 642 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 PNPLA2Q96AD5 504 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 THOC3Q96J01 351 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 AGAP4Q96P64 663 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 MACROD1Q9BQ69 325 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 MCMBPQ9BTE3 642 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 LHPPQ9H008 270 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 RAB17Q9H0T7 212 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 RHOJQ9H4E5 214 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 POPDC3Q9HBV1 291 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 ZBTB20Q9HC78 741 aaPredicted RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 SMYD2Q9NRG4 433 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 C14orf105Q9NVL8 296 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 GRHL1Q9NZI5 618 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 TXNDC16Q9P2K2 825 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 CTNNAL1Q9UBT7 734 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 IKZF3Q9UKT9 509 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 VPS4AQ9UN37 437 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 SH2B3Q9UQQ2 575 aa7.04□□□□□ -1.28
NUP88-205ENST00000572809 MRPS2Q9Y399 296 aaKnown RBP7.04□□□□□ -1.28
NUP88-205ENST00000572809 TENM4Q6N022 2769 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 NSG1A0A0A6YYJ2 146 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 TCRBV9S1A1TA0A576 114 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 FAM159BA6NKW6 160 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 CXorf49A8MYA2 514 aaPredicted RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 SGK494L7N484 410 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MAP2K7O14733 419 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 PCDH17O14917 1159 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 TMPRSS2O15393 492 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 PDPK1O15530 556 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 BMP10O95393 424 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 HPP00738 406 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 TGFB1P01137 390 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SERPIND1P05546 499 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SLC35G6P0C7Q6 338 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 SPRP35270 261 aaPredicted RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 BCL6P41182 706 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MAGEA4P43358 317 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 GLRBP48167 497 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 HNMTP50135 292 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 GPX6P59796 221 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CDKL1Q00532 357 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 MEF2AQ02078 507 aaPredicted RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 Q0VFX4 171 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ZNF460Q14592 562 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 USP10Q14694 798 aaKnown RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 TRADDQ15628 312 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 PPP1R3AQ16821 1122 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CATSPEREQ5SY80 951 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 GRTP1Q5TC63 336 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 FAAH2Q6GMR7 532 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 IGFL2Q6UWQ7 119 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ACAD11Q709F0 780 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 NLRC3Q7RTR2 1065 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 ZNF572Q7Z3I7 529 aaPredicted RBP7.03□□□□□ -1.28
NUP88-205ENST00000572809 CCDC25Q86WR0 208 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 KBTBD2Q8IY47 623 aa7.03□□□□□ -1.28
NUP88-205ENST00000572809 TBC1D19Q8N5T2 526 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms