RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 CDKL4Q5MAI5 379 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 FCRLBQ6BAA4 426 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 PAPD4Q6PIY7 484 aaKnown RBP16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 RIPOR1Q6ZS17 1223 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 CENPLQ8N0S6 344 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 KIF18AQ8NI77 898 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 TRIM44Q96DX7 344 aaPredicted RBP16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 ATOH8Q96SQ7 321 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 SLC29A3Q9BZD2 475 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 VPS11Q9H270 941 aa16.74■□□□□ 0.27
CTDNEP1-207ENST00000572043 A0A096LPK6 155 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 DYTNA2CJ06 578 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 ANKDD1BA6NHY2 528 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 ERI3O43414 337 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 KERAO60938 352 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 SMIM10L1P0DMW3 83 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 EPORP19235 508 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 CD22P20273 847 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 IL10P22301 178 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 TYK2P29597 1187 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 ECHS1P30084 290 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PLA2G16P53816 162 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 OR4D2P58180 307 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 BTG2P78543 158 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 IRF8Q02556 426 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 ZNF33BQ06732 778 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 CHIT1Q13231 466 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 EIF2S3LQ2VIR3 472 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 NIPAL1Q6NVV3 410 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 CEP128Q6ZU80 1094 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 LRRC70Q7Z2Q7 622 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 VN1R5Q7Z5H4 357 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 CA13Q8N1Q1 262 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 FAM26EQ8N5C1 309 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PLPP5Q8NEB5 264 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 TTLQ8NG68 377 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 OR1N1Q8NGS0 311 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PRR7Q8TB68 274 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PTCD3Q96EY7 689 aaKnown RBP16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 SMIM10Q96HG1 83 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 FAR2Q96K12 515 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PTCHD1Q96NR3 888 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.73■□□□□ 0.275e-26■■□□□ 14.3
CTDNEP1-207ENST00000572043 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 ZNF490Q9ULM2 529 aaPredicted RBP16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 PCM1Q15154 2024 aa16.73■□□□□ 0.27
CTDNEP1-207ENST00000572043 LRIT2A6NDA9 550 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 MAGEB17A8MXT2 336 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 KIF2AO00139 706 aaPredicted RBP16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 SH3BGRLO75368 114 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 WDPCPO95876 746 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 CYC1P08574 325 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 RNH1P13489 461 aaKnown RBP16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 MAOAP21397 527 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 SERPINB8P50452 374 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 FAM83EQ2M2I3 478 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 GLE1Q53GS7 698 aaKnown RBP16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 ABHD17BQ5VST6 288 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 PLAG1Q6DJT9 500 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 GAL3ST3Q96A11 431 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 MS4A6EQ96DS6 147 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 LPAR4Q99677 370 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 NT5DC2Q9H857 520 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 KCNK13Q9HB14 408 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 SPENQ96T58 3664 aaKnown RBP16.72■□□□□ 0.27
CTDNEP1-207ENST00000572043 HEATR5BQ9P2D3 2071 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 A8MUA0 341 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 POC1B-GALNT4F8VUJ3 575 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 PRMT3O60678 531 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 CLEC3AO75596 197 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 ALDOAP04075 364 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 TUBB4AP04350 444 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 INHBAP08476 426 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 PCNAP12004 261 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 GFAPP14136 432 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 MSH2P43246 934 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 AP2B1P63010 937 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 RUNX2Q13950 521 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 HIST2H2ACQ16777 129 aaPredicted RBP16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 FHL5Q5TD97 284 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 HIST2H2AA3Q6FI13 130 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 RELL1Q8IUW5 271 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 TEX9Q8N6V9 391 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 GRHL3Q8TE85 626 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 PAFAH2Q99487 392 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 REXO4Q9GZR2 422 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 EHD1Q9H4M9 534 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 STMN3Q9NZ72 180 aa16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 MDC1Q14676 2089 aaKnown RBP16.71■□□□□ 0.27
CTDNEP1-207ENST00000572043 HELZ2Q9BYK8 2649 aaKnown RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 LRRC14BA6NHZ5 514 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 K7EPI3 171 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 AGFG2O95081 481 aa16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 TBX6O95947 436 aaPredicted RBP16.7■□□□□ 0.26
CTDNEP1-207ENST00000572043 MTHFD2P13995 350 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms