RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CHCHD3Q9NX63 227 aaKnown RBP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 VNN3Q9NY84 501 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 TMPRSS11EQ9UL52 423 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 A0A096LPI6 279 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 H3BQ06 376 aaPredicted RBP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 ZNF821O75541 412 aaPredicted RBP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 CDC123O75794 336 aaPredicted RBP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 RPS3P23396 243 aaKnown RBP eCLIP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 RPS6KA3P51812 740 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 CAMK1Q14012 370 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 TJAP1Q5JTD0 557 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 ARTNQ5T4W7 220 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 Q6ZNB5 142 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 PTCHD4Q6ZW05 846 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 TRIM73Q86UV7 250 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 MSRB3Q8IXL7 192 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 FAM217AQ8IXS0 508 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 SLC34A3Q8N130 599 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 ARRDC3Q96B67 414 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 COPS4Q9BT78 406 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 NTMT1Q9BV86 223 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 AMBRA1Q9C0C7 1298 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 ABCG4Q9H172 646 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 SEMA3GQ9NS98 782 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 RBMX2Q9Y388 322 aaKnown RBP15.57■□□□□ 0.08
RAB40B-206ENST00000571995 CACNA1GO43497 2377 aa15.57■□□□□ 0.08
RAB40B-206ENST00000571995 RGS10O43665 173 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 CCNDBP1O95273 360 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ALPLP05186 524 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PPP2R1BP30154 601 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 AVPR1BP47901 424 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 RPP38P78345 283 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 CDK6Q00534 326 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ILF2Q12905 390 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 FAM46CQ5VWP2 391 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 FATE1Q969F0 183 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ADAP2Q9NPF8 381 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PHPT1Q9NRX4 125 aaPredicted RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 GIMAP4Q9NUV9 329 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ENTPD4Q9Y227 616 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 TRBC2A0A5B9 178 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PIPSLA2A3N6 862 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ACOX3O15254 700 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PI15O43692 258 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 CD22P20273 847 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 C21orf33P30042 268 aaPredicted RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ERVK-21P61565 698 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 DNASE1L3Q13609 305 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PLEKHS1Q5SXH7 462 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 EIF3MQ7L2H7 374 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 DGLUCYQ7Z3D6 616 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 DCP2Q8IU60 420 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 TRAM1L1Q8N609 369 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 OR5D16Q8NGK9 328 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 OR8K5Q8NH50 307 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 LRRC3BQ96PB8 259 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 FUNDC2Q9BWH2 189 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 SPNS1Q9H2V7 528 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 MUC13Q9H3R2 512 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 OTOL1A6NHN0 477 aaPredicted RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PSMD11O00231 422 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 WISP3O95389 354 aaPredicted RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 ELAVL3Q14576 367 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 KLHL35Q6PF15 583 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 KLHDC8BQ8IXV7 354 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PACRGLQ8N7B6 248 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 TOX2Q96NM4 488 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 PRR14Q9BWN1 585 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 LGR4Q9BXB1 951 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 DCAF13Q9NV06 445 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 TRNAU1APQ9NX07 287 aaKnown RBP15.56■□□□□ 0.08
RAB40B-206ENST00000571995 TAS2R16Q9NYV7 291 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 SLC9A8Q9Y2E8 581 aa15.56■□□□□ 0.08
RAB40B-206ENST00000571995 A0A1W2PQU0 124 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 SLC35F4A4IF30 521 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 CNOT3O75175 753 aaKnown RBP15.55■□□□□ 0.08
RAB40B-206ENST00000571995 CBSLP0DN79 551 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 CBSP35520 551 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 NCBP2P52298 156 aaKnown RBP eCLIP15.55■□□□□ 0.08
RAB40B-206ENST00000571995 LEXMQ3ZCV2 418 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 SMARCD3Q6STE5 483 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 CASP12Q6UXS9 341 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 LRRTM4Q86VH4 590 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 TSPEARQ8WU66 669 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 HERVK_113Q902F9 699 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 NTN4Q9HB63 628 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 NDOR1Q9UHB4 597 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 LINC01553A4QN01 128 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 FAM220BPB1ANY3 271 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 BOLA2-SMG1P6H3BVE0 249 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 SLC1A7O00341 560 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 QSOX1O00391 747 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 KDM1AO60341 852 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 CD36P16671 472 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 IFNA8P32881 189 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 ASMTP46597 345 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 GAB1Q13480 694 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 SCN5AQ14524 2016 aa15.55■□□□□ 0.08
RAB40B-206ENST00000571995 C9orf50Q5SZB4 431 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms