RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IRGQQ8WZA9 623 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 FAM122AQ96E09 287 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SPAG5Q96R06 1193 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 DDX50Q9BQ39 737 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 CRACR2AQ9BSW2 395 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 LRRC1Q9BTT6 524 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 LHX5Q9H2C1 402 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SYNCQ9H7C4 482 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 HEBP1Q9NRV9 189 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 ABCC13Q9NSE7 274 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SAMSN1Q9NSI8 373 aaKnown RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 GTSE1Q9NYZ3 720 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 WDR35Q9P2L0 1181 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 UBA2Q9UBT2 640 aaPredicted RBP3.82□□□□□ -1.8
NUP88-202ENST00000570937 DNAJC12Q9UKB3 198 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 CCL26Q9Y258 94 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 OR2W1Q9Y3N9 320 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 CPQQ9Y646 472 aa3.82□□□□□ -1.8
NUP88-202ENST00000570937 SPTBN5Q9NRC6 3674 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 CTAGE9A4FU28 777 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 PRR23AA6NEV1 266 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 HHLA1C9JL84 531 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TRDMT1O14717 391 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 CAPN9O14815 690 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 FGF17O60258 216 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 WDR1O75083 606 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 NKX2-2O95096 273 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 LSM8O95777 96 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 PDGFBP01127 241 aaPredicted RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 ATP1A1P05023 1023 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 DCNP07585 359 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 CTAGE8P0CG41 777 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 SLC2A3P11169 496 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 KRT10P13645 584 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 UCHL3P15374 230 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 DESP17661 470 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TCEA1P23193 301 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 EIF2DP41214 584 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 APOBEC1P41238 236 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 CXCL12P48061 93 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 CCR3P51677 355 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TAS2R38P59533 333 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 PHEXP78562 749 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ADIGQ0VDE8 80 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 CSTF3Q12996 717 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 DCTN2Q13561 401 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 KRT31Q15323 416 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ZNF77Q15935 545 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ZNF528Q3MIS6 628 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 CDONQ4KMG0 1287 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 BSPRYQ5W0U4 402 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 C18orf63Q68DL7 685 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 LCN10Q6JVE6 187 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 PPP1R2P3Q6NXS1 205 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 C19orf48Q6RUI8 117 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ZNF677Q86XU0 584 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 UNC45BQ8IWX7 931 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 CTAGE4Q8IX94 777 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TMEM105Q8N8V8 129 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ZNF557Q8N988 423 aaPredicted RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 TMEM116Q8NCL8 245 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TMEM35BQ8NCS4 154 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 NEK11Q8NG66 645 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 OR14L1PQ8NHC6 308 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 SHC3Q92529 594 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 SGCDQ92629 289 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 SECISBP2LQ93073 1101 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 CLDN23Q96B33 292 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 LRRC3BQ96PB8 259 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 XPO6Q96QU8 1125 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 SLC22A12Q96S37 553 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 P2RY13Q9BPV8 354 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 MAGIXQ9H6Y5 334 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 ECT2Q9H8V3 914 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 LMAN1LQ9HAT1 526 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 FAM207AQ9NSI2 230 aaPredicted RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 TAB2Q9NYJ8 693 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 DEC1Q9P2X7 70 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 LIMA1Q9UHB6 759 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 SLC12A6Q9UHW9 1150 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 NDRG2Q9UN36 371 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 HBS1LQ9Y450 684 aaKnown RBP3.81□□□□□ -1.8
NUP88-202ENST00000570937 MAU2Q9Y6X3 613 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 C2orf16Q68DN1 1984 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 DENND4AQ7Z401 1863 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 CUL9Q8IWT3 2517 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 NCOR1O75376 2440 aa3.81□□□□□ -1.8
NUP88-202ENST00000570937 TSC2P49815 1807 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 SYCE3A1L190 88 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 YJEFN3A6XGL0 299 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 PRSS47A8MTI9 375 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 FAM90A26D6RGX4 464 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 E7ENQ6 273 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 F8VZ95 297 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 M0QZ24 198 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 KCNN4O15554 427 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 TIMM44O43615 452 aa3.8□□□□□ -1.8
NUP88-202ENST00000570937 PI15O43692 258 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms