RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HIST1H2AHQ96KK5 128 aa17.75■□□□□ 0.43
SCARF1-204ENST00000570902 HIST1H2AJQ99878 128 aa17.75■□□□□ 0.43
SCARF1-204ENST00000570902 H2AFJQ9BTM1 129 aa17.75■□□□□ 0.43
SCARF1-204ENST00000570902 HOMER3Q9NSC5 361 aa17.75■□□□□ 0.43
SCARF1-204ENST00000570902 TRMT6Q9UJA5 497 aaKnown RBP17.75■□□□□ 0.43
SCARF1-204ENST00000570902 ADAMTS6Q9UKP5 1117 aa17.75■□□□□ 0.43
SCARF1-204ENST00000570902 TCRBV16S1A1N1A0A5B0 115 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 SLC16A5O15375 505 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 NADKO95544 446 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-204ENST00000570902 SERPIND1P05546 499 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 MLNP12872 115 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 RFC3P40938 356 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 KCNJ1P48048 391 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 TERF1P54274 439 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 OLR1P78380 273 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 PAOXQ6QHF9 649 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 MBOAT1Q6ZNC8 495 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 ACAD11Q709F0 780 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 CAND1Q86VP6 1230 aaKnown RBP17.74■□□□□ 0.43
SCARF1-204ENST00000570902 SPNS2Q8IVW8 549 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 CYP4Z2PQ8N1L4 340 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 TMEM156Q8N614 296 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 NFAM1Q8NET5 270 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-204ENST00000570902 OR4K1Q8NGD4 311 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 AARSD1Q9BTE6 412 aaKnown RBP17.74■□□□□ 0.43
SCARF1-204ENST00000570902 UCK2Q9BZX2 261 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 PRDM9Q9NQV7 894 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 PLSCR2Q9NRY7 297 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 HRH3Q9Y5N1 445 aa17.74■□□□□ 0.43
SCARF1-204ENST00000570902 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 ZCWPW2A0A1B0GU75 182 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 TRBC2A0A5B9 178 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 PABPN1LA6NDY0 278 aaKnown RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 PSMD12O00232 456 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 FGGP02679 453 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 HOXD4P09016 255 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 ZNF888P0CJ79 500 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 CD99P14209 185 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 CXCR5P32302 372 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 CLCN2P51788 898 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 BTG2P78543 158 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 CLYBLQ8N0X4 340 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 MYO1HQ8N1T3 1032 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 NT5CQ8TCD5 201 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 EEF1AKMT1Q8WVE0 214 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 XAB2Q9HCS7 855 aaKnown RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 TIMMDC1Q9NPL8 285 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 C20orf96Q9NUD7 363 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-204ENST00000570902 FBXO5Q9UKT4 447 aa17.73■□□□□ 0.43
SCARF1-204ENST00000570902 IGKV3D-11A0A0A0MRZ8 115 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 FAM221AA4D161 298 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 URADA6NGE7 173 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 DNAJB6O75190 326 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 HAUS5O94927 633 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 RNH1P13489 461 aaKnown RBP17.72■□□□□ 0.43
SCARF1-204ENST00000570902 MAOAP21397 527 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 DNAJA1P31689 397 aaKnown RBP17.72■□□□□ 0.43
SCARF1-204ENST00000570902 DHX9Q08211 1270 aaKnown RBP17.72■□□□□ 0.43
SCARF1-204ENST00000570902 GPS1Q13098 491 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 TERF2Q15554 542 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 KIAA0408Q6ZU52 694 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 B3GNT7Q8NFL0 401 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 ANP32BQ92688 251 aaKnown RBP17.72■□□□□ 0.43
SCARF1-204ENST00000570902 SNF8Q96H20 258 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 FAM167BQ9BTA0 163 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 TAS2R13Q9NYV9 303 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 ZFP69BQ9UJL9 534 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 HCFC1P51610 2035 aa17.72■□□□□ 0.43
SCARF1-204ENST00000570902 TRBV11-1A0A0K0K1C0 115 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 ITGA10O75578 1167 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 PDE9AO76083 593 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 ZWINTO95229 277 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 B3GALT4O96024 378 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 TUBB4AP04350 444 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 AHRP35869 848 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 VPS41P49754 854 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 GPR85P60893 370 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 PMPCAQ10713 525 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 MYBPHQ13203 477 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 TRIP13Q15645 432 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-204ENST00000570902 ANKRD22Q5VYY1 191 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 DUPD1Q68J44 220 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 CCDC71Q8IV32 467 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-204ENST00000570902 APCDD1LQ8NCL9 501 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 CHDHQ8NE62 594 aaPredicted RBP17.71■□□□□ 0.43
SCARF1-204ENST00000570902 MYRIPQ8NFW9 859 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 OR52N2Q8NGI0 321 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 UTP15Q8TED0 518 aaKnown RBP17.71■□□□□ 0.43
SCARF1-204ENST00000570902 SEC16BQ96JE7 1060 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 TMUB1Q9BVT8 246 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 KCNF1Q9H3M0 494 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 FBXW2Q9UKT8 454 aa17.71■□□□□ 0.43
SCARF1-204ENST00000570902 A8MUA0 341 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 ACOT7O00154 380 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 SCTRP47872 440 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 AP1S2P56377 157 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 NUP107P57740 925 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 FOLH1Q04609 750 aa17.7■□□□□ 0.42
SCARF1-204ENST00000570902 CSHL1Q14406 222 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms