RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SHISA2Q6UWI4 295 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 C1orf52Q8N6N3 182 aaKnown RBP9.55□□□□□ -0.88
GDE1-205ENST00000569899 CLHC1Q8NHS4 586 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 FBXO27Q8NI29 283 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 NSL1Q96IY1 281 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 FCRL1Q96LA6 429 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 FCRL4Q96PJ5 515 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 MS4A8Q9BY19 250 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.55□□□□□ -0.88
GDE1-205ENST00000569899 PITHD1Q9GZP4 211 aaPredicted RBP9.55□□□□□ -0.88
GDE1-205ENST00000569899 ABCG4Q9H172 646 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 RHBGQ9H310 441 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 ACTL8Q9H568 366 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 NT5DC2Q9H857 520 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 ASIC5Q9NY37 505 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 GPN3Q9UHW5 284 aaPredicted RBP9.55□□□□□ -0.88
GDE1-205ENST00000569899 DMDP11532 3685 aa9.55□□□□□ -0.88
GDE1-205ENST00000569899 MYO15AQ9UKN7 3530 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 LOC100653049A0A140TA62 436 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 PRR33A8MZF0 331 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 ANKRD28O15084 1053 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 YKT6O15498 198 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 ADAM11O75078 769 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 KRT34O76011 436 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SERPIND1P05546 499 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 BCKDHAP12694 445 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SDC1P18827 310 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 TACR1P25103 407 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 PRDX6P30041 224 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 HNRNPH1P31943 449 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 ZFP36L2P47974 494 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 MRPL19P49406 292 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 PPM1FP49593 454 aaPredicted RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 GFERP55789 205 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 RAE1P78406 368 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 ACSM2AQ08AH3 577 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 MAD2L1Q13257 205 aaPredicted RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 SUZ12Q15022 739 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 HERC3Q15034 1050 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 RPS6KA2Q15349 733 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 ACSM2BQ68CK6 577 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 IRGCQ6NXR0 463 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 ZCCHC8Q6NZY4 707 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 FIGLAQ6QHK4 219 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 RINLQ6ZS11 566 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 FUNDC1Q8IVP5 155 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 KIF2BQ8N4N8 673 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 OR4C6Q8NH72 309 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SLC7A6OSQ96CW6 309 aaPredicted RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 TSSK3Q96PN8 268 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SERPINI1Q99574 410 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 GTPBP2Q9BX10 602 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 SORBS1Q9BX66 1292 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 AICDAQ9GZX7 198 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 LRIT1Q9P2V4 623 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 PPT2Q9UMR5 302 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SNX7Q9UNH6 387 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 EIF3LQ9Y262 564 aaKnown RBP9.54□□□□□ -0.88
GDE1-205ENST00000569899 UNC13CQ8NB66 2214 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 SCN3AQ9NY46 2000 aa9.54□□□□□ -0.88
GDE1-205ENST00000569899 LY6G6EA0A0G2JKS1 128 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CASC3O15234 703 aaKnown RBP9.53□□□□□ -0.88
GDE1-205ENST00000569899 NDUFS4O43181 175 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 TNFSF14O43557 240 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 SIGLEC6O43699 453 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 NUDT21O43809 227 aaKnown RBP9.53□□□□□ -0.88
GDE1-205ENST00000569899 CTSVO60911 334 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 SYPP08247 313 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 ALPPL2P10696 532 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 ST6GAL1P15907 406 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 ENGP17813 658 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CAPN3P20807 821 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 HRH2P25021 359 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 IL12AP29459 219 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 SERPINB1P30740 379 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 TIA1P31483 386 aaKnown RBP eCLIP9.53□□□□□ -0.88
GDE1-205ENST00000569899 OR1D5P58170 312 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CUL3Q13618 768 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 ZIC1Q15915 447 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 SPIN4Q56A73 249 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CACHD1Q5VU97 1274 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 NKAIN2Q5VXU1 208 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 NOXRED1Q6NXP6 359 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 KLHL35Q6PF15 583 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 COMMD6Q7Z4G1 85 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 VN1R4Q7Z5H5 301 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 MFSD9Q8NBP5 474 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CDC26Q8NHZ8 85 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 WDR48Q8TAF3 677 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 PROKR1Q8TCW9 393 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CREB3L4Q8TEY5 395 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CHTF18Q8WVB6 975 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 RCN3Q96D15 328 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 CMTM5Q96DZ9 223 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 C11orf24Q96F05 449 aaPredicted RBP9.53□□□□□ -0.88
GDE1-205ENST00000569899 LOXL4Q96JB6 756 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 F2RL3Q96RI0 385 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 MACROD1Q9BQ69 325 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 DUSP23Q9BVJ7 150 aa9.53□□□□□ -0.88
GDE1-205ENST00000569899 SARGQ9BW04 601 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms