RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 DEPDC1Q5TB30 811 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 WASH2PQ6VEQ5 465 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF551Q7Z340 670 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CYP4Z1Q86W10 505 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NUDT13Q86X67 352 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CFAP206Q8IYR0 622 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CLHC1Q8NHS4 586 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 RGMAQ96B86 450 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 YIPF6Q96EC8 236 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 THAP11Q96EK4 314 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PDXPQ96GD0 296 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZSWIM3Q96MP5 696 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 HBEGFQ99075 208 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 FAIM2Q9BWQ8 316 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 FANCEQ9HB96 536 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TSR3Q9UJK0 312 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SAMHD1Q9Y3Z3 626 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PCDHGA2Q9Y5H1 932 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 GNG14A0A1W2PPG7 69 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 EME2A4GXA9 379 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 RGS10O43665 173 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 BNIP3LO60238 219 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NDUFS2O75306 463 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CPSF4O95639 269 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF682O95780 498 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ANGPTL1O95841 491 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 BCL10O95999 233 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 INHBBP09529 407 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TRIM23P36406 574 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 KIAA1024LP59773 190 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 CNTN1Q12860 1018 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 NFATC3Q12968 1075 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TBCEQ15813 527 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 BHLHB9Q6PI77 547 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TRAPPC5Q8IUR0 188 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 MIPOL1Q8TD10 442 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZFPM2Q8WW38 1151 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF300Q96RE9 604 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 INSM2Q96T92 566 aaPredicted RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PIP5K1AQ99755 562 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 SLC35A5Q9BS91 424 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 BTBD2Q9BX70 525 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 DDX31Q9H8H2 851 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PREBQ9HCU5 417 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PRSS16Q9NQE7 514 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 TMEM184CQ9NVA4 438 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 EXD2Q9NVH0 621 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 LYARQ9NX58 379 aaKnown RBP7.54□□□□□ -1.2
LINC00559-201ENST00000569476 PIKFYVEQ9Y2I7 2098 aa7.54□□□□□ -1.2
LINC00559-201ENST00000569476 A0A1W2PRB8 838 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 IRGMA1A4Y4 181 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PLK4O00444 970 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CBFA2T3O75081 653 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PKLRP30613 574 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 P2RY2P41231 377 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 XCR1P46094 333 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PREPP48147 710 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CLK3P49761 638 aaKnown RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CDK3Q00526 305 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TGM3Q08188 693 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 MICAQ29983 383 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 FAM78AQ5JUQ0 283 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 KIAA1211LQ6NV74 962 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CD300LDQ6UXZ3 194 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 SAMD14Q8IZD0 417 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 GALNT6Q8NCL4 622 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 BBS10Q8TAM1 723 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PHF10Q8WUB8 498 aaKnown RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TMIGD2Q96BF3 282 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PYCR2Q96C36 320 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TEFMQ96QE5 360 aaKnown RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 DPH2Q9BQC3 489 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PDP1Q9P0J1 537 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 MBD1Q9UIS9 605 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ENPP4Q9Y6X5 453 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TMEM202A6NGA9 273 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ANKDD1BA6NHY2 528 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PDPK1O15530 556 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 MMP20O60882 483 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ETS2P15036 469 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CDH15P55291 814 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 DSTNP60981 165 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 OLR1P78380 273 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 C2orf80Q0P641 193 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 NPRL3Q12980 569 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 GPM6BQ13491 265 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 CAMK1Q14012 370 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ZNF846Q147U1 533 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 GRIN2CQ14957 1233 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ZIC1Q15915 447 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 REEP3Q6NUK4 255 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 TRMT11Q7Z4G4 463 aaKnown RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 OFCC1Q8IZS5 231 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 RORBQ92753 470 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 EZH1Q92800 747 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 PMM1Q92871 262 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 BADQ92934 168 aa7.53□□□□□ -1.2
LINC00559-201ENST00000569476 ZBED6CLQ96FA7 236 aaPredicted RBP7.53□□□□□ -1.2
LINC00559-201ENST00000569476 EBPLQ9BY08 206 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms