RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PLA2G16P53816 162 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 TGM3Q08188 693 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 CUL3Q13618 768 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ABRAXAS2Q15018 415 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 TGIF1Q15583 401 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 DEFB134Q4QY38 66 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 SH2D4BQ5SQS7 431 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 KANK2Q63ZY3 851 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 LCN10Q6JVE6 187 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 NIPAL1Q6NVV3 410 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 TRIM40Q6P9F5 258 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ABHD17CQ6PCB6 329 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 FAM199XQ6PEV8 388 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-224ENST00000568877 PDSS2Q86YH6 399 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 HOMEZQ8IX15 550 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 CLYBLQ8N0X4 340 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ARFGAP2Q8N6H7 521 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 IL22RA1Q8N6P7 574 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 SRFBP1Q8NEF9 429 aaKnown RBP15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ZNF75CPQ92670 426 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-224ENST00000568877 HBEGFQ99075 208 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 SERPINI1Q99574 410 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 CENPKQ9BS16 269 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 BRF2Q9HAW0 419 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 ZDHHC2Q9UIJ5 367 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.89■□□□□ 0.13
COMMD4-224ENST00000568877 NAALAD2Q9Y3Q0 740 aa15.89■□□□□ 0.13
COMMD4-224ENST00000568877 SERTM1A2A2V5 107 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 TMEM233B4DJY2 109 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SGK494L7N484 410 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SAP18O00422 153 aaKnown RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 KLF11O14901 512 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SNNO75324 88 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 ETHE1O95571 254 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 B3GALT4O96024 378 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 ATXN8OSP0DMR3 200 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 HSD3B1P14060 373 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 HSD3B2P26439 372 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SKP1P63208 163 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 BTN3A2P78410 334 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 CSTF3Q12996 717 aaKnown RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 DSG2Q14126 1118 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 ARHGAP40Q5TG30 622 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 UBE3DQ7Z6J8 389 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 GBP7Q8N8V2 638 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 AGR3Q8TD06 166 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 KCNE4Q8WWG9 221 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 COL26A1Q96A83 441 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 RGMAQ96B86 450 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 FAR2Q96K12 515 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 KCNC2Q96PR1 638 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SORT1Q99523 831 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 C17orf62Q9BQA9 187 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 ILKAPQ9H0C8 392 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 PRDM7Q9NQW5 492 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SLC22A11Q9NSA0 550 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 THAP1Q9NVV9 213 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 IFT80Q9P2H3 777 aaPredicted RBP15.88■□□□□ 0.13
COMMD4-224ENST00000568877 SLC12A4Q9UP95 1085 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 FIS1Q9Y3D6 152 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 RAP2CQ9Y3L5 183 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 ASPMQ8IZT6 3477 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 NCOR2Q9Y618 2525 aa15.88■□□□□ 0.13
COMMD4-224ENST00000568877 A0A088AWK7 358 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 A0A0G2JN53 185 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 LOC101059948A0A1B0GTJ6 334 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 C9J4A7 227 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 CHEK2O96017 543 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 TCN2P20062 427 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 ZNF10P21506 573 aaPredicted RBP15.87■□□□□ 0.13
COMMD4-224ENST00000568877 FBLP22087 321 aaKnown RBP15.87■□□□□ 0.13
COMMD4-224ENST00000568877 RAP1GDS1P52306 607 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 ARFIP1P53367 373 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 CLN3Q13286 438 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 SLC9A5Q14940 896 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 UGT3A2Q3SY77 523 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 SCIMPQ6UWF3 145 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 COX15Q7KZN9 410 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 TRIM46Q7Z4K8 759 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 ZNF781Q8N8C0 355 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 AMER3Q8N944 861 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 LRRC8CQ8TDW0 803 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 CT55Q8WUE5 264 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 NAF1Q96HR8 494 aaKnown RBP15.87■□□□□ 0.13
COMMD4-224ENST00000568877 QRFPRQ96P65 431 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 TBCDQ9BTW9 1192 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 NMRK1Q9NWW6 199 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 HAO1Q9UJM8 370 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 CROTQ9UKG9 612 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 DNAJC15Q9Y5T4 150 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 SDK2Q58EX2 2172 aa15.87■□□□□ 0.13
COMMD4-224ENST00000568877 FREM2Q5SZK8 3169 aa15.86■□□□□ 0.13
COMMD4-224ENST00000568877 TMEM8BA6NDV4 472 aa15.86■□□□□ 0.13
COMMD4-224ENST00000568877 ZNF860A6NHJ4 632 aa15.86■□□□□ 0.13
COMMD4-224ENST00000568877 RTCAO00442 366 aaKnown RBP15.86■□□□□ 0.13
COMMD4-224ENST00000568877 PLPP1O14494 284 aa15.86■□□□□ 0.13
COMMD4-224ENST00000568877 RDH16O75452 317 aa15.86■□□□□ 0.13
COMMD4-224ENST00000568877 SEMA3DO95025 777 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms