RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 SEMA3GQ9NS98 782 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 NXT1Q9UKK6 140 aaKnown RBP12.3□□□□□ -0.44
CNOT1-213ENST00000568158 MKL2Q9ULH7 1088 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 GRID1Q9ULK0 1009 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 HS3ST3B1Q9Y662 390 aa12.3□□□□□ -0.44
CNOT1-213ENST00000568158 A0A1B0GTL3 188 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 A6NL46 340 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 IDSB3KWA1 339 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 FAM227AF5H4B4 570 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 G3V2L1 256 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 K7EM74 188 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 PEX12O00623 359 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 COPEO14579 308 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ERI3O43414 337 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 GLRA3O75311 464 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ALOX12BO75342 701 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 SUPT7LO94864 414 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CLDN9O95484 217 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 IGHEP01854 428 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 PROCP04070 461 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 TUBBP07437 444 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 RPS17P08708 135 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 IMPDH1P20839 514 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ATP5F1P24539 256 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CRHR1P34998 444 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ARL1P40616 181 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 XCR1P46094 333 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CCT5P48643 541 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 NEK2P51955 445 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CCNG1P51959 295 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 STXBP1P61764 594 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 RUNX2Q13950 521 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 RBBP7Q16576 425 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 MED25Q71SY5 747 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 UBE3DQ7Z6J8 389 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 MILR1Q7Z6M3 343 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CNPY4Q8N129 248 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 L3MBTL4Q8NA19 623 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 LSM14AQ8ND56 463 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 TRPC4APQ8TEL6 797 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 UBE2E3Q969T4 207 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ABHD17AQ96GS6 310 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 QRFPRQ96P65 431 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 NTMT1Q9BV86 223 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 RBCK1Q9BYM8 510 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 REXO4Q9GZR2 422 aaKnown RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 RRAGDQ9NQL2 400 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-213ENST00000568158 PRDM7Q9NQW5 492 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ATMQ13315 3056 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 ZFYVE26Q68DK2 2539 aa12.29□□□□□ -0.44
CNOT1-213ENST00000568158 CHD6Q8TD26 2715 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 AGPSO00116 658 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 SAP18O00422 153 aaKnown RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 PLIN3O60664 434 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 SPAG7O75391 227 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 CREB1P16220 341 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 NR1D1P20393 614 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 GSTM2P28161 218 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 PRKAA2P54646 552 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 CLCQ05315 142 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 ZRSR2Q15696 482 aaKnown RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 ADPRMQ3LIE5 342 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 MINDY4Q4G0A6 757 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 MFSD4BQ5TF39 518 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 ABHD17CQ6PCB6 329 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 TRABD2AQ86V40 505 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 PARP9Q8IXQ6 854 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 IQCKQ8N0W5 287 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 CA13Q8N1Q1 262 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 RIBC1Q8N443 379 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 TMEM102Q8N9M5 508 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 OR2L5Q8NG80 312 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 OR4F6Q8NGB9 312 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 OR11G2Q8NGC1 345 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 HUS1BQ8NHY5 278 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 PPP4R1Q8TF05 950 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 GAL3ST3Q96A11 431 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 SEC16BQ96JE7 1060 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 FAR2Q96K12 515 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 FER1L6-AS2Q96M78 137 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 MTERF1Q99551 399 aaKnown RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 C1QTNF3Q9BXJ4 246 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 MS4A8Q9BY19 250 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 VN1R1Q9GZP7 353 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 OR51B5Q9H339 312 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 C14orf105Q9NVL8 296 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 LGALS13Q9UHV8 139 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 ZNF225Q9UK10 706 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 PCDHGA11Q9Y5H2 935 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 TNRC6AQ8NDV7 1962 aaKnown RBP12.28□□□□□ -0.44
CNOT1-213ENST00000568158 CACNA1GO43497 2377 aa12.28□□□□□ -0.44
CNOT1-213ENST00000568158 MAGEB17A8MXT2 336 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms