RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 LRRC1Q9BTT6 524 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 UNKQ9C0B0 810 aaKnown RBP6.52□□□□□ -1.37
SF3B3-209ENST00000567635 SLC6A16Q9GZN6 736 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 PITHD1Q9GZP4 211 aaPredicted RBP6.52□□□□□ -1.37
SF3B3-209ENST00000567635 SPNS1Q9H2V7 528 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 KLHL31Q9H511 634 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 NT5DC2Q9H857 520 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 L2HGDHQ9H9P8 463 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 NMRAL1Q9HBL8 299 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 LANCL2Q9NS86 450 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 PLA2G3Q9NZ20 509 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 GPRC5BQ9NZH0 403 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 CD274Q9NZQ7 290 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 TEKT2Q9UIF3 430 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 PTBP2Q9UKA9 531 aaKnown RBP6.52□□□□□ -1.37
SF3B3-209ENST00000567635 ZNF407Q9C0G0 2248 aa6.52□□□□□ -1.37
SF3B3-209ENST00000567635 UTP20O75691 2785 aaKnown RBP6.52□□□□□ -1.37
SF3B3-209ENST00000567635 TRAV17A0A0B4J275 112 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 IGHV3-20A0A0C4DH32 117 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CTAGE15A4D2H0 777 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ANKUB1A6NFN9 424 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ZNF860A6NHJ4 632 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ANKDD1BA6NHY2 528 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 A8MUI8 341 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 PRMT3O60678 531 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 B4GALT2O60909 372 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 SEC24DO94855 1032 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 WDPCPO95876 746 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 B3GALT4O96024 378 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 C1QAP02745 245 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 FHP07954 510 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CELA2AP08217 269 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 LTA4HP09960 611 aaKnown RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 RNH1P13489 461 aaKnown RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CD1DP15813 335 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 JAK1P23458 1154 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 KCNC1P48547 511 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 HSPA7P48741 367 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 OR4D2P58180 307 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 RAB8AP61006 207 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 STXBP1P61764 594 aaKnown RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 OLR1P78380 273 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 BTN3A2P78410 334 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 GABPB1Q06547 395 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 HYAL2Q12891 473 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 OR4D1Q15615 310 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ZKSCAN8Q15776 578 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 EXT1Q16394 746 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 HIST2H2ACQ16777 129 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 WHAMMP3Q1A5X7 153 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 SFT2D3Q587I9 215 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 TOR1AIP1Q5JTV8 583 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 HIST2H2AA3Q6FI13 130 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 H3F3CQ6NXT2 135 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 C8orf74Q6P047 294 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 TMIGD1Q6UXZ0 262 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CEP128Q6ZU80 1094 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 RAPH1Q70E73 1250 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CCDC91Q7Z6B0 441 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 TBC1D1Q86TI0 1168 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ISCA2Q86U28 154 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CTAGE6Q86UF2 777 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 MMGT1Q8N4V1 131 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 SNX31Q8N9S9 440 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 MNS1Q8NEH6 495 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 SUN3Q8TAQ9 357 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 GRHL3Q8TE85 626 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 FAR1Q8WVX9 515 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 SEC16BQ96JE7 1060 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 FAR2Q96K12 515 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ZNF354BQ96LW1 612 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 PTCHD1Q96NR3 888 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 RNF32Q9H0A6 362 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 EHD1Q9H4M9 534 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 KCNK13Q9HB14 408 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ZDHHC18Q9NUE0 388 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 DNAJC11Q9NVH1 559 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 WWOXQ9NZC7 414 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ZNF490Q9ULM2 529 aaPredicted RBP6.51□□□□□ -1.37
SF3B3-209ENST00000567635 RNF112Q9ULX5 631 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 NTNG1Q9Y2I2 539 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 ACOT9Q9Y305 439 aa6.51□□□□□ -1.37
SF3B3-209ENST00000567635 DOPEY1Q5JWR5 2465 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 A0A087X1B8 175 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 ESYT3A0FGR9 886 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 BLACEA4D250 179 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 LRIT2A6NDA9 550 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 FAM227AF5H4B4 570 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 PSMD12O00232 456 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-209ENST00000567635 CCNT2O60583 730 aaKnown RBP6.5□□□□□ -1.37
SF3B3-209ENST00000567635 SEMA7AO75326 666 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 CLEC3AO75596 197 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 CDC123O75794 336 aaPredicted RBP6.5□□□□□ -1.37
SF3B3-209ENST00000567635 SLU7O95391 586 aaKnown RBP6.5□□□□□ -1.37
SF3B3-209ENST00000567635 DDAH2O95865 285 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 F10P00742 488 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 SLC35E2BP0CK96 405 aa6.5□□□□□ -1.37
SF3B3-209ENST00000567635 GP1BBP13224 206 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms