RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 UFL1O94874 794 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CPNE6O95741 557 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 WDPCPO95876 746 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 MT-ND1P03886 318 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 F7P08709 466 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NHLRC4P0CG21 123 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PCMT1P22061 227 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ALDH1B1P30837 517 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SRD5A2P31213 254 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CAPGP40121 348 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 RPL21P46778 160 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NAPAP54920 295 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PRMT2P55345 433 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 FUT7Q11130 342 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NME3Q13232 169 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DOC2AQ14183 400 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CTTNQ14247 550 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 P2RY14Q15391 338 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CAMK4Q16566 473 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DUOXA1Q1HG43 343 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ANKRD55Q3KP44 614 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 UGT3A2Q3SY77 523 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 BCL7AQ4VC05 210 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ZC2HC1CQ53FD0 456 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 HSP90B2PQ58FF3 399 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ARMCX4Q5H9R4 360 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 EARS2Q5JPH6 523 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 AKNAD1Q5T1N1 836 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TAF3Q5VWG9 929 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TTC23Q5W5X9 447 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TTC19Q6DKK2 380 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TYW3Q6IPR3 259 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM159AQ6UWV7 190 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF813Q6ZN06 617 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DEF8Q6ZN54 512 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TMCO2Q7Z6W1 182 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ARL14Q8N4G2 192 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DCLK2Q8N568 766 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 TEX45Q8NA69 505 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DRAXINQ8NBI3 349 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NOA1Q8NC60 698 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 NPEPL1Q8NDH3 523 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ZNF397Q8NF99 534 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ENGASEQ8NFI3 743 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 OR10Q1Q8NGQ4 319 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 OR14A16Q8NHC5 309 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 RNF128Q8TEB7 428 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 U2AF1L4Q8WU68 220 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SEPT8Q92599 483 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 OSTF1Q92882 214 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 GLYATL1Q969I3 302 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 DHX58Q96C10 678 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 RASD2Q96D21 266 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 MRPL53Q96EL3 112 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PIWIL1Q96J94 861 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ZFYVE19Q96K21 471 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 FAM20AQ96MK3 541 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 GUCD1Q96NT3 240 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 VPS35Q96QK1 796 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 CCNL2Q96S94 520 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PRMT1Q99873 361 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 WDR77Q9BQA1 342 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SIKE1Q9BRV8 207 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 BTBD10Q9BSF8 475 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ALKBH7Q9BT30 221 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 STMN4Q9H169 189 aaPredicted RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 LRMDAQ9H2I8 198 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 MED20Q9H944 212 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 KCNK13Q9HB14 408 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ACKR4Q9NPB9 350 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 AGPAT5Q9NUQ2 364 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 ACOXLQ9NUZ1 547 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 BARHL2Q9NY43 387 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 UTP6Q9NYH9 597 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 RNF14Q9UBS8 474 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 LRWD1Q9UFC0 647 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 FZD1Q9UP38 647 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 PLCL2Q9UPR0 1127 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 SRPRBQ9Y5M8 271 aaKnown RBP3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 COLEC10Q9Y6Z7 277 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 MAST3O60307 1309 aa3.1□□□□□ -1.91
HERPUD1-211ENST00000566550 MAPKBP1O60336 1514 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 MED19A0JLT2 244 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 LRRC3CA6NJW4 275 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 C4orf47A7E2U8 309 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 TARM1B6A8C7 271 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 NPIPA3F8WFD2 350 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GOLGA8SH3BPF8 625 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 GAPDHSO14556 408 aaPredicted RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 POLR2DO15514 142 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 LDB2O43679 373 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 EXTL3O43909 919 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 ECI2O75521 394 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 H1F0P07305 194 aaKnown RBP3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 HKR1P10072 659 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 RALBP11234 206 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CYP11B1P15538 503 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 CKMT2P17540 419 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 TSPAN8P19075 237 aa3.09□□□□□ -1.91
HERPUD1-211ENST00000566550 HNF1AP20823 631 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms