RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 CAPN1P07384 714 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 CHRNGP07510 517 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 JMJD7P0C870 316 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SMIM10L1P0DMW3 83 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SLC1A6P48664 564 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 AQP5P55064 265 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ITGA1P56199 1179 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 VSX2P58304 361 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ACTR3P61158 418 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 BTKQ06187 659 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 GRM7Q14831 915 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 KPNB1Q14974 876 aaKnown RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 RBBP5Q15291 538 aaKnown RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 DEFB110Q30KQ9 67 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 FAM214AQ32MH5 1076 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ADPRMQ3LIE5 342 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 C3orf38Q5JPI3 329 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 PWWP2BQ6NUJ5 590 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 LRRC74BQ6ZQY2 392 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 RINLQ6ZS11 566 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 RNF165Q6ZSG1 346 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ZCCHC23Q6ZST2 131 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ASPGQ86U10 573 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 CUZD1Q86UP6 607 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 MYLK4Q86YV6 388 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 CAMKVQ8NCB2 501 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 USP7Q93009 1102 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 RERGQ96A58 199 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 REPS1Q96D71 796 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SMIM10Q96HG1 83 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SLC29A3Q9BZD2 475 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF395Q9H8N7 513 aaPredicted RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 FANCEQ9HB96 536 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 EML4Q9HC35 981 aaKnown RBP12.02□□□□□ -0.49
SF3B3-206ENST00000565990 TNFRSF12AQ9NP84 129 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ASCL3Q9NQ33 180 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 PISDQ9UG56 409 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ACSL6Q9UKU0 697 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 SCN3AQ9NY46 2000 aa12.02□□□□□ -0.49
SF3B3-206ENST00000565990 ANKDD1BA6NHY2 528 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 TNFSF15O95150 251 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ONECUT2O95948 504 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ARFIP1P53367 373 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ARSFP54793 590 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 FOXA1P55317 472 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 GABREP78334 506 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 CYP4F3Q08477 520 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 RCN1Q15293 331 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SH2D4BQ5SQS7 431 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM164Q5U3C3 297 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 GARNL3Q5VVW2 1013 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 FRG2Q64ET8 278 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 TMEM214Q6NUQ4 689 aaKnown RBP12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ERMP1Q7Z2K6 904 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 GPR135Q8IZ08 494 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 CLYBLQ8N0X4 340 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 AFAP1L2Q8N4X5 818 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF655Q8N720 491 aaPredicted RBP12.01□□□□□ -0.49
SF3B3-206ENST00000565990 CSNK1A1LQ8N752 337 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 CDYL2Q8N8U2 506 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SLC38A9Q8NBW4 561 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 METTL6Q8TCB7 284 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 PMEPA1Q969W9 287 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 LRFN5Q96NI6 719 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 FRG2BQ96QU4 278 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SORT1Q99523 831 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 CTRCQ99895 268 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 AICDAQ9GZX7 198 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 BCAP29Q9UHQ4 241 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 ZDHHC2Q9UIJ5 367 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SNX6Q9UNH7 406 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 TRAF6Q9Y4K3 522 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 B3GALT1Q9Y5Z6 326 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SLC22A7Q9Y694 548 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 FER1L5A0AVI2 2057 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 SDK2Q58EX2 2172 aa12.01□□□□□ -0.49
SF3B3-206ENST00000565990 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 AGRPO00253 132 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 MANBAO00462 879 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 AZIN1O14977 448 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 P2RX6O15547 441 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 ZNF749O43361 778 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 ENTPD5O75356 428 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 ULK1O75385 1050 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 MED26O95402 600 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 TIAF1O95411 115 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 CAPNS1P04632 268 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 HBQ1P09105 142 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 UROSP10746 265 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 PTX3P26022 381 aaPredicted RBP12□□□□□ -0.49
SF3B3-206ENST00000565990 RORAP35398 523 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 NEK2P51955 445 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 MAPK10P53779 464 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 CUL3Q13618 768 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 FAM53BQ14153 422 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 HKDC1Q2TB90 917 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 DEPDC1Q5TB30 811 aa12□□□□□ -0.49
SF3B3-206ENST00000565990 KANK2Q63ZY3 851 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms