RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 CCT5P48643 541 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 PIK3CGP48736 1102 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 SOX8P57073 446 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 AIMP2Q13155 320 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 TUBB8Q3ZCM7 444 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 TOR1AIP1Q5JTV8 583 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ADNP2Q6IQ32 1131 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ASB18Q6ZVZ8 466 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 PDSS2Q86YH6 399 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ZC3H7AQ8IWR0 971 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 IQCKQ8N0W5 287 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 GALNT16Q8N428 558 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 FDCSPQ8NFU4 85 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 C1QTNF3Q9BXJ4 246 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 RHBGQ9H310 441 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 KLHL31Q9H511 634 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 NOL11Q9H8H0 719 aaKnown RBP13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ZBTB26Q9HCK0 441 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 GPR83Q9NYM4 423 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 GRID1Q9ULK0 1009 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF462Q96JM2 2506 aa13.08□□□□□ -0.32
HERPUD1-210ENST00000565966 CCDC151A5D8V7 595 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ANKDD1BA6NHY2 528 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 C4orf51C9J302 202 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 K7EM74 188 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 COPEO14579 308 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 OR7A17O14581 309 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 SUV39H1O43463 412 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 PLIN3O60664 434 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 UGDHO60701 494 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 GALR3O60755 368 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 RDH16O75452 317 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ERLIN1O75477 346 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 CLEC3AO75596 197 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 TBX6O95947 436 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 B3GALT4O96024 378 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF888P0CJ79 500 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 SMIM10L1P0DMW3 83 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 NR1D1P20393 614 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 IL10P22301 178 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ATP5F1P24539 256 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 HNF4AP41235 474 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 XCR1P46094 333 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 PGDP52209 483 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 LIPJQ5W064 366 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 MED27Q6P2C8 311 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 RPS27LQ71UM5 84 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 LAS2Q8IYD9 372 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 SHISA5Q8N114 240 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 L3MBTL4Q8NA19 623 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 OR11G2Q8NGC1 345 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 CCT6BQ92526 530 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 UBE2E3Q969T4 207 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 SMIM10Q96HG1 83 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ZIM3Q96PE6 472 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 NTMT1Q9BV86 223 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 NUDT9Q9BW91 350 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 C12orf65Q9H3J6 166 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ACTR8Q9H981 624 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 CLK4Q9HAZ1 481 aaKnown RBP13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 MKS1Q9NXB0 559 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 HCN3Q9P1Z3 774 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 FBXL4Q9UKA2 621 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 MKL2Q9ULH7 1088 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF451Q9Y4E5 1061 aa13.07□□□□□ -0.32
HERPUD1-210ENST00000565966 G3V2L1 256 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 ALOX12BO75342 701 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 PDGFAP04085 211 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 CYC1P08574 325 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 ACPPP15309 386 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 IMPDH1P20839 514 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 HNRNPH1P31943 449 aaKnown RBP13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 HPDP32754 393 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 PRKAA2P54646 552 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 CDH13P55290 713 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 RAB8AP61006 207 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 HERVK_113P63132 956 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 KLRB1Q12918 225 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 TRAF3Q13114 568 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 MYBPC3Q14896 1274 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 ADPRMQ3LIE5 342 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 DEFB134Q4QY38 66 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 ZNF678Q5SXM1 525 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 BEND6Q5SZJ8 279 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 TMEM205Q6UW68 189 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 HPS6Q86YV9 775 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 SLC22A9Q8IVM8 553 aa13.06□□□□□ -0.32
HERPUD1-210ENST00000565966 SRRM1Q8IYB3 904 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms