RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 SPACA6W5XKT8 324 aa7.41□□□□□ -1.22
CDH1-208ENST00000565810 WDR87Q6ZQQ6 2873 aa7.41□□□□□ -1.22
CDH1-208ENST00000565810 GOLGA8QA0A0J9YX86 632 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 GNG14A0A1W2PPG7 69 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 FAM149AA5PLN7 773 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 GOLGA8OA6NCC3 632 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 NPIPB8E9PQR5 432 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 GOLGA8NF8WBI6 632 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SDHDO14521 159 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ZNF195O14628 629 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 LSM1O15116 133 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 B3GALT2O43825 422 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ABCB7O75027 752 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CPNE3O75131 537 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 GUCY1B2O75343 617 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 ETHE1O95571 254 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 JUNP05412 331 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 KLK1P06870 262 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 KLK3P07288 261 aaPredicted RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 CTSBP07858 339 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ZNF888P0CJ79 500 aaPredicted RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 SMIM10L1P0DMW3 83 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 PIM1P11309 404 aaPredicted RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 PCSK2P16519 638 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ITIH1P19827 911 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 AGXTP21549 392 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 EPHA3P29320 983 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 HNRNPH1P31943 449 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 IDH3AP50213 366 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 MTTPP55157 894 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 RPL38P63173 70 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 EMX2Q04743 252 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SF3A3Q12874 501 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDH1-208ENST00000565810 HYAL2Q12891 473 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SLC9A5Q14940 896 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 RPS6KA2Q15349 733 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 DEFB134Q4QY38 66 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SLC9B1Q4ZJI4 515 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 XKR7Q5GH72 579 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CCNYL2Q5T2Q4 361 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 VWA5B1Q5TIE3 1220 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 OR4C11Q6IEV9 310 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 RHBDD2Q6NTF9 364 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 TTLL10Q6ZVT0 673 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 LARP4Q71RC2 724 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDH1-208ENST00000565810 SPATA21Q7Z572 469 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SPATA19Q7Z5L4 167 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 NUDT13Q86X67 352 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ZFAND4Q86XD8 727 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 FAM9CQ8IZT9 166 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ZCCHC7Q8N3Z6 543 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 C1orf52Q8N6N3 182 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 BMPERQ8N8U9 685 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 RFWD2Q8NHY2 731 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 PROKR1Q8TCW9 393 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CHTF18Q8WVB6 975 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 STON2Q8WXE9 905 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CLIP3Q96DZ5 547 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SMIM10Q96HG1 83 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 C3orf30Q96M34 536 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SERINC2Q96SA4 455 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CCT8L2Q96SF2 557 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 C17orf62Q9BQA9 187 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 DDA1Q9BW61 102 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 MRPL1Q9BYD6 325 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 WDR55Q9H6Y2 383 aaPredicted RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 SYNPO2LQ9H987 977 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 POLR1BQ9H9Y6 1135 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 CLK4Q9HAZ1 481 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 APMAPQ9HDC9 416 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 TCF7L2Q9NQB0 619 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ADAM29Q9UKF5 820 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 SATB2Q9UPW6 733 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 WBP11Q9Y2W2 641 aaKnown RBP7.4□□□□□ -1.22
CDH1-208ENST00000565810 CCL27Q9Y4X3 112 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 PCDHGA3Q9Y5H0 932 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 PTGDR2Q9Y5Y4 395 aa7.4□□□□□ -1.22
CDH1-208ENST00000565810 ASXL3Q9C0F0 2248 aa7.4□□□□□ -1.23
CDH1-208ENST00000565810 GVINP1Q7Z2Y8 2422 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 TP53BP1Q12888 1972 aaPredicted RBP7.39□□□□□ -1.23
CDH1-208ENST00000565810 A0A0G2JN53 185 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 A0A1B0GX78 115 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 H0YIG0 161 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 H3BMH7 237 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 PSMD12O00232 456 aaPredicted RBP7.39□□□□□ -1.23
CDH1-208ENST00000565810 RTCAO00442 366 aaKnown RBP7.39□□□□□ -1.23
CDH1-208ENST00000565810 PLPP1O14494 284 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 NDUFAB1O14561 156 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 DSCR3O14972 297 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 UBDO15205 165 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 PCDH7O60245 1069 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 SNX3O60493 162 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 GALR3O60755 368 aaPredicted RBP7.39□□□□□ -1.23
CDH1-208ENST00000565810 KIAA0754O94854 1291 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 KLHL18O94889 574 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 TNFSF15O95150 251 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 TBX6O95947 436 aaPredicted RBP7.39□□□□□ -1.23
CDH1-208ENST00000565810 FAM107AO95990 144 aa7.39□□□□□ -1.23
CDH1-208ENST00000565810 NTRK1P04629 796 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms