RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 SPG21Q9NZD8 308 aa3.83□□□□□ -1.8
CHD9-215ENST00000565442 PLCL2Q9UPR0 1127 aa3.83□□□□□ -1.8
CHD9-215ENST00000565442 CSNK1G3Q9Y6M4 447 aa3.83□□□□□ -1.8
CHD9-215ENST00000565442 NEDD4P46934 1319 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 A0A087X0K7 114 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 KINO60870 393 aaKnown RBP3.82□□□□□ -1.8
CHD9-215ENST00000565442 GRAP2O75791 330 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 AKAP3O75969 853 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 LETM1O95202 739 aaPredicted RBP3.82□□□□□ -1.8
CHD9-215ENST00000565442 CTNNA2P26232 953 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 HLA-FP30511 346 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 HNF4AP41235 474 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 TSFMP43897 325 aaKnown RBP3.82□□□□□ -1.8
CHD9-215ENST00000565442 KHKP50053 298 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SLC34A1Q06495 639 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 ACKR1Q16570 336 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SGCBQ16585 318 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 FAM106AQ4KMX7 169 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 IFI44LQ53G44 452 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SLC10A5Q5PT55 438 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 AGAP6Q5VW22 663 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 CES4AQ5XG92 561 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SLC27A4Q6P1M0 643 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 MACC1Q6ZN28 852 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 C15orf52Q6ZUT6 534 aaKnown RBP3.82□□□□□ -1.8
CHD9-215ENST00000565442 CHMP1BQ7LBR1 199 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 CATSPERDQ86XM0 798 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 TEX26Q8N6G2 289 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SPC24Q8NBT2 197 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 LPCAT1Q8NF37 534 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 OR5T2Q8NGG2 359 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 ST7LQ8TDW4 575 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 SEPT8Q92599 483 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 CASP10Q92851 521 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 FAM46BQ96A09 425 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 AKIRIN1Q9H9L7 192 aaPredicted RBP3.82□□□□□ -1.8
CHD9-215ENST00000565442 C3orf14Q9HBI5 128 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 FBXW2Q9UKT8 454 aa3.82□□□□□ -1.8
CHD9-215ENST00000565442 M0R296 226 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 SURF4O15260 269 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 ECE2O60344 883 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 RTN2O75298 545 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 LRCH4O75427 683 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 ZFAND5O76080 213 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 VDRP11473 427 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 KRT3P12035 628 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 PRKACGP22612 351 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 GJB2P29033 226 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 SLC1A3P43003 542 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 KIAA1024LP59773 190 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 TEFQ10587 303 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 GRB14Q14449 540 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 MAPK11Q15759 364 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 FUT11Q495W5 492 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 AARDQ4LEZ3 155 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 WLSQ5T9L3 541 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 BSPRYQ5W0U4 402 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 KCTD11Q693B1 232 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 ADAM5Q6NVV9 412 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 RAPH1Q70E73 1250 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 SFRP1Q8N474 314 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 CCDC185Q8N715 623 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 NAT8LQ8N9F0 302 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 OR4D10Q8NGI6 311 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 ZNF519Q8TB69 540 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 SNX21Q969T3 373 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 BPIFA2Q96DR5 249 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 CABS1Q96KC9 395 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 CCDC43Q96MW1 224 aaKnown RBP3.81□□□□□ -1.8
CHD9-215ENST00000565442 USP28Q96RU2 1077 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 ASCL2Q99929 193 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 HOXD1Q9GZZ0 328 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 DBF4Q9UBU7 674 aaPredicted RBP3.81□□□□□ -1.8
CHD9-215ENST00000565442 EXOGQ9Y2C4 368 aaKnown RBP3.81□□□□□ -1.8
CHD9-215ENST00000565442 ZNF510Q9Y2H8 683 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 SNX5Q9Y5X3 404 aa3.81□□□□□ -1.8
CHD9-215ENST00000565442 MYH15Q9Y2K3 1946 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 C2orf92A0A1B0GVN3 265 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 FAM149AA5PLN7 773 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 C5orf51A6NDU8 294 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 TRIM64A6NGJ6 449 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 TRIM64BA6NI03 449 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 CALCAP01258 141 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 CPA3P15088 417 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 CASP3P42574 277 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 SMSP52788 366 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 IRX4P78413 519 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 UBXN1Q04323 297 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 SLC3A1Q07837 685 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 ACTN3Q08043 901 aaPredicted RBP3.8□□□□□ -1.8
CHD9-215ENST00000565442 CEACAM7Q14002 265 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 RPS6KA1Q15418 735 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 FAM189A2Q15884 450 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 SPANXN4Q5MJ08 99 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 TCEAL6Q6IPX3 200 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 TMEM126BQ8IUX1 230 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 LAX1Q8IWV1 398 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 THEM5Q8N1Q8 247 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 TMEM99Q8N816 258 aa3.8□□□□□ -1.8
CHD9-215ENST00000565442 ZNF614Q8N883 585 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms