RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 PCDHGA3Q9Y5H0 932 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PLK4O00444 970 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 TSPAN6O43657 245 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 TLL1O43897 1013 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 DLGAP3O95886 979 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PTTG1O95997 202 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PTHP01270 115 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 URODP06132 367 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 SRPRAP08240 638 aaKnown RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 CYP2A6P11509 494 aaPredicted RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 IMPA1P29218 277 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 VIPR1P32241 457 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 HOXD12P35452 270 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 OR1E2P47887 323 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 RGS6P49758 472 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 SEPHS1P49903 392 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PNLIPRP1P54315 467 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 RPS13P62277 151 aaKnown RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 HBA1P69905 142 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ST3GAL4Q11206 333 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 SELENBP1Q13228 472 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 IRF3Q14653 427 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ZNF385BQ569K4 471 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ARMCX4Q5H9R4 360 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 MED27Q6P2C8 311 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 TMEM53Q6P2H8 277 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 BRAT1Q6PJG6 821 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ZNF852Q6ZMS4 543 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.97□□□□□ -1.29
SMG1-210ENST00000565224 Q6ZVU0 165 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ZNF367Q7RTV3 350 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 NLRP8Q86W28 1048 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 RAVER1Q8IY67 606 aaKnown RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 OXR1Q8N573 874 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 TRAM1L1Q8N609 369 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 OR4K1Q8NGD4 311 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 OR56A3Q8NH54 315 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 NFKBIDQ8NI38 313 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 C9orf43Q8TAL5 461 aaPredicted RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 FOXJ1Q92949 421 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 TMEM159Q96B96 161 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 REPS1Q96D71 796 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 CRELD1Q96HD1 420 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PKP4Q99569 1192 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 SLC35A5Q9BS91 424 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 CCM2Q9BSQ5 444 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 OR51E2Q9H255 320 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 REEP4Q9H6H4 257 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 ZNF556Q9HAH1 456 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 PRDM8Q9NQV8 689 aa6.97□□□□□ -1.29
SMG1-210ENST00000565224 EXO1Q9UQ84 846 aaKnown RBP6.97□□□□□ -1.29
SMG1-210ENST00000565224 TET1Q8NFU7 2136 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 MICAL3Q7RTP6 2002 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 TRAV19A0A0A6YYK7 116 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 LEFTY2O00292 366 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 MED26O95402 600 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 C6orf47O95873 294 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 SLC16A8O95907 504 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 IFNA14P01570 189 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PABPC1P11940 636 aaKnown RBP6.96□□□□□ -1.29
SMG1-210ENST00000565224 ZNF8P17098 575 aaPredicted RBP6.96□□□□□ -1.29
SMG1-210ENST00000565224 ETV3P41162 512 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 MAPK9P45984 424 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PREPP48147 710 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PRIM2P49643 509 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 CASP9P55211 416 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 CDC42P60953 191 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 ZNF763Q0D2J5 394 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 E2F2Q14209 437 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 KCNJ8Q15842 424 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 SOWAHCQ53LP3 525 aaPredicted RBP6.96□□□□□ -1.29
SMG1-210ENST00000565224 TOR1AIP1Q5JTV8 583 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 TRIM40Q6P9F5 258 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 SLCO4C1Q6ZQN7 724 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 Q6ZVL8 140 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 CCDC80Q76M96 950 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 TMPRSS11BQ86T26 416 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 AKAP14Q86UN6 197 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 SLC39A11Q8N1S5 342 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PARP16Q8N5Y8 322 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 OR9Q2Q8NGE9 314 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 RAET1EQ8TD07 263 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 GEMIN6Q8WXD5 167 aaKnown RBP6.96□□□□□ -1.29
SMG1-210ENST00000565224 AUTS2Q8WXX7 1259 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 ZNF558Q96NG5 402 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PIP5K1AQ99755 562 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 FAM83CQ9BQN1 747 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 CHCHD6Q9BRQ6 235 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 CENPOQ9BU64 300 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 ZSCAN5AQ9BUG6 496 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 RIOK2Q9BVS4 552 aaKnown RBP6.96□□□□□ -1.29
SMG1-210ENST00000565224 EHD1Q9H4M9 534 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 TMEM38AQ9H6F2 299 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 RNF167Q9H6Y7 350 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 MS4A12Q9NXJ0 267 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 ENOPH1Q9UHY7 261 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 ATP11BQ9Y2G3 1177 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 IFT52Q9Y366 437 aa6.96□□□□□ -1.29
SMG1-210ENST00000565224 PEX16Q9Y5Y5 336 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms