RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 MAD2L1Q13257 205 aaPredicted RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 KCNC3Q14003 757 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 EFR3AQ14156 821 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 HABP2Q14520 560 aaPredicted RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 QPRTQ15274 297 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 KIF19Q2TAC6 998 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 ADPRMQ3LIE5 342 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 XKR9Q5GH70 373 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 KHDC1LQ5JSQ8 128 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 HECTD2Q5U5R9 776 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 JADE1Q6IE81 842 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 DENND1BQ6P3S1 775 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 Q6YL49 198 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 DPY19L3Q6ZPD9 716 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 FAM92BQ6ZTR7 304 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 GDPD3Q7L5L3 318 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 STRADAQ7RTN6 431 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 DGLUCYQ7Z3D6 616 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 GPR149Q86SP6 731 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 CCDC190Q86UF4 302 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 PPP1R3BQ86XI6 285 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 RNF130Q86XS8 419 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 ADGRG3Q86Y34 549 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 EPHX4Q8IUS5 362 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 RIMKLAQ8IXN7 391 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 PARP16Q8N5Y8 322 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 PCDH20Q8N6Y1 951 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 RNF148Q8N7C7 305 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 OR9Q1Q8NGQ5 310 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 MAPK15Q8TD08 544 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 SLC22A17Q8WUG5 538 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 FAR1Q8WVX9 515 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 SLC7A6Q92536 515 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 AP3S1Q92572 193 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 SLC9A6Q92581 669 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 LPAR1Q92633 364 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 TMEM125Q96AQ2 219 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 L3HYPDHQ96EM0 354 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 CHFRQ96EP1 664 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 GIMAP5Q96F15 307 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 ZC3HAV1LQ96H79 300 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 FBXL20Q96IG2 436 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 ST6GAL2Q96JF0 529 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 SECISBP2Q96T21 854 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 CSF3RQ99062 836 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 RAD9AQ99638 391 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 TTLL2Q9BWV7 592 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 DGCR6LQ9BY27 220 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 TINAGL1Q9GZM7 467 aaPredicted RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 CCDC90BQ9GZT6 254 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 NAA50Q9GZZ1 169 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 GABARAPL1Q9H0R8 117 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 FAM83DQ9H4H8 585 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 SCPEP1Q9HB40 452 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 FOLH1BQ9HBA9 442 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 PRDM11Q9NQV5 511 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 ASAH2Q9NR71 780 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 POLE3Q9NRF9 147 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 GGA3Q9NZ52 723 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 CCDC167Q9P0B6 97 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 DNMT3BQ9UBC3 853 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 EIF3KQ9UBQ5 218 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 GABBR1Q9UBS5 961 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 KLQ9UEF7 1012 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 RUVBL2Q9Y230 463 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 BTRCQ9Y297 605 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 KLHL20Q9Y2M5 609 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 AAR2Q9Y312 384 aaKnown RBP5.39□□□□□ -1.55
CHD9-210ENST00000564582 RNF215Q9Y6U7 377 aa5.39□□□□□ -1.55
CHD9-210ENST00000564582 FAM234BA2RU67 622 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 C2CD4BA6NLJ0 364 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 C12orf71A8MTZ7 269 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 A8MVJ9 347 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 HNRNPCL2B2RXH8 293 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 TARM1B6A8C7 271 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 E9PLN8 166 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 INO80B-WBP1J3KQ70 363 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 SNAP23O00161 211 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 BCKDKO14874 412 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 ORC5O43913 435 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 SCN2BO60939 215 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 OR2B3O76000 313 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 INMTO95050 263 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 KCNK2O95069 426 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 LGI1O95970 557 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 AHSGP02765 367 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 PRKCGP05129 697 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 SLC2A3P11169 496 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 PSKH1P11801 424 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 PEPDP12955 493 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 HLA-EP13747 358 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 ZNF30P17039 623 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 DDX5P17844 614 aaKnown RBP5.38□□□□□ -1.55
CHD9-210ENST00000564582 CYP3A5P20815 502 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 ATP6V1B2P21281 511 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 GPX3P22352 226 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 PSMB9P28065 219 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 RORAP35398 523 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 HCAR3P49019 387 aa5.38□□□□□ -1.55
CHD9-210ENST00000564582 CLCN5P51795 746 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms