RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 CNPPD1Q9BV87 410 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 TTTY12Q9BZ98 90 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 LDAHQ9H6V9 325 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 ZDHHC11Q9H8X9 412 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 CHRAC1Q9NRG0 131 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 DEPPQ9NTK1 212 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 ABHD10Q9NUJ1 306 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 HPF1Q9NWY4 346 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 DRG1Q9Y295 367 aaKnown RBP6.82□□□□□ -1.32
VPS4A-203ENST00000564399 PCDHA3Q9Y5H8 950 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 LIPGQ9Y5X9 500 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 SLC22A7Q9Y694 548 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 ZANQ9Y493 2812 aa6.82□□□□□ -1.32
VPS4A-203ENST00000564399 HEATR5AQ86XA9 2040 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 KIAA1549Q9HCM3 1950 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ATP6AP2A0A1C7CYW4 349 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 TUBAL3A6NHL2 446 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 HSPB2A8KAH6 182 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 INAFM1C9JVW0 142 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 E5RI56 91 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 H3BMM5 538 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 H7C1Q1 480 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 DVL2O14641 736 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 PFDN6O15212 129 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 LCMT2O60294 686 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 DNAJB6O75190 326 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ATP6AP2O75787 350 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 SERPIND1P05546 499 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 EPXP11678 715 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 MAOAP21397 527 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 BMP5P22003 454 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 CTNNA1P35221 906 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 PTPN7P35236 360 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 GRK3P35626 688 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 MAGEA5P43359 124 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ASCL1P50553 236 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 NAP1L1P55209 391 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 GBX1Q14549 363 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 KCNJ11Q14654 390 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 HSPB2Q16082 182 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 DEFB134Q4QY38 66 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 RIPPLY2Q5TAB7 128 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 NDUFAF5Q5TEU4 345 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 IL20RBQ6UXL0 311 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 GK5Q6ZS86 529 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 TRILQ7L0X0 811 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 SDCCAG8Q86SQ7 713 aaPredicted RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 REXO1L1PQ8IX06 675 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ARMC10Q8N2F6 343 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 VWA5B2Q8N398 1253 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 NFAM1Q8NET5 270 aaPredicted RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ASB15Q8WXK1 588 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 PEX13Q92968 403 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 RNASE6Q93091 150 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ALKBH8Q96BT7 664 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 SARAFQ96BY9 339 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 TM4SF19Q96DZ7 209 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 DOCK7Q96N67 2140 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 BIRC8Q96P09 236 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 CCDC77Q9BR77 488 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 YIPF4Q9BSR8 244 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 FAM129AQ9BZQ8 928 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 RHBGQ9H310 441 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 PLEKHF2Q9H8W4 249 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ETNK1Q9HBU6 452 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 CCDC177Q9NQR7 707 aaPredicted RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 BEX4Q9NWD9 120 aaPredicted RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 SAMD15Q9P1V8 674 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 MTRF1LQ9UGC7 380 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 CRYL1Q9Y2S2 319 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 YARS2Q9Y2Z4 477 aaKnown RBP6.81□□□□□ -1.32
VPS4A-203ENST00000564399 ABCA1O95477 2261 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 USF3Q68DE3 2245 aa6.81□□□□□ -1.32
VPS4A-203ENST00000564399 NCKAP5O14513 1909 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 MXRA5Q9NR99 2828 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 A0A0G2JMM0 328 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 A0A1W2PPB8 328 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 A0A1W2PRS3 328 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 TCRBV16S1A1N1A0A5B0 115 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 KIR3DP1A8MWS1 328 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 PSMD12O00232 456 aaPredicted RBP6.8□□□□□ -1.32
VPS4A-203ENST00000564399 AQP7O14520 342 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 NDUFS4O43181 175 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 ZBTB14O43829 449 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 GALR3O60755 368 aaPredicted RBP6.8□□□□□ -1.32
VPS4A-203ENST00000564399 OR2J2O76002 312 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 MYO1DO94832 1006 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 B3GALT4O96024 378 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 IFNB1P01574 187 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 IGHG3P01860 377 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 ESR1P03372 595 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 C8BP07358 591 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 GABRA1P14867 456 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 ALOX12P18054 663 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 CD53P19397 219 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 IMPA1P29218 277 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 FDFT1P37268 417 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 SESN2P58004 480 aaPredicted RBP6.8□□□□□ -1.32
VPS4A-203ENST00000564399 CRADDP78560 199 aa6.8□□□□□ -1.32
VPS4A-203ENST00000564399 SLC10A1Q14973 349 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms