RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 FOXC1Q12948 553 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 TLDC1Q6P9B6 456 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 ABHD17CQ6PCB6 329 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 ZNF793Q6ZN11 406 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 RIPOR1Q6ZS17 1223 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 TTLL10Q6ZVT0 673 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 SLC38A9Q8NBW4 561 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 EPN3Q9H201 632 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 LRTM1Q9HBL6 345 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 ENAMQ9NRM1 1142 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 SPTBN4Q9H254 2564 aa25.65■■□□□ 1.7
SH3GL3-205ENST00000563901 EEDO75530 441 aaKnown RBP25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 RSL1D1O76021 490 aaKnown RBP25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 SMIM10L1P0DMW3 83 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 BTN3A2P78410 334 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 EIF3IQ13347 325 aaKnown RBP25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 AP5B1Q2VPB7 878 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 RFTN2Q52LD8 501 aaPredicted RBP25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 TMEM35AQ53FP2 167 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 MANEAQ5SRI9 462 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 TRIM40Q6P9F5 258 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 OR9A4Q8NGU2 314 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 OR8K5Q8NH50 307 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 RGMAQ96B86 450 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 SMIM10Q96HG1 83 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 ELAC2Q9BQ52 826 aaKnown RBP25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 EBPLQ9BY08 206 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 PRDM7Q9NQW5 492 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 RIC8BQ9NVN3 520 aa25.64■■□□□ 1.7
SH3GL3-205ENST00000563901 SCN2AQ99250 2005 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 A0A0A6YYC8 382 aaPredicted RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 I3L1I5 382 aaPredicted RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 DNAJB6O75190 326 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 SEC22BO75396 215 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 ALOX12P18054 663 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 BSGP35613 385 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 RPL38P63173 70 aaKnown RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 C1orf189Q5VU69 101 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 ABHD13Q7L211 337 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 COMMD6Q7Z4G1 85 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 CPLX4Q7Z7G2 160 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 METTL4Q8N3J2 472 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 CHTF18Q8WVB6 975 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 MAELQ96JY0 434 aaKnown RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 NDC1Q9BTX1 674 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 C1orf50Q9BV19 199 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 TMEM120AQ9BXJ8 343 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 ACTR5Q9H9F9 607 aaPredicted RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 C1orf109Q9NX04 203 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 NDOR1Q9UHB4 597 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 NAALAD2Q9Y3Q0 740 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 POLR3HQ9Y535 204 aaPredicted RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 C9orf172C9J069 976 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 FOXS1O43638 330 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 SEMA3DO95025 777 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 SPINK2P20155 84 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 ALAS2P22557 587 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 CERS1P27544 350 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 SSR2P43308 183 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 OLR1P78380 273 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 RAE1P78406 368 aaKnown RBP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 KIAA0040Q15053 153 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 ATP6AP1LQ52LC2 224 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 C6orf136Q5SQH8 315 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 NXNQ6DKJ4 435 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 LARP4Q71RC2 724 aaKnown RBP eCLIP25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 QRFPRQ96P65 431 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 CCT7Q99832 543 aa25.63■■□□□ 1.69
SH3GL3-205ENST00000563901 URADA6NGE7 173 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 SGK494L7N484 410 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 TNFSF15O95150 251 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 PRR35P0CG20 571 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 PRPH2P23942 346 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 GABREP78334 506 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 MUM1Q2TAK8 710 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 TUBB8Q3ZCM7 444 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 DCAF12Q5T6F0 453 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 OR4C11Q6IEV9 310 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 KCNC2Q96PR1 638 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 TAAR9Q96RI9 348 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 CENPKQ9BS16 269 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 SLC7A5P2Q9GIP4 190 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 NSRP1Q9H0G5 558 aaKnown RBP25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 PFDN4Q9NQP4 134 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 NMRK1Q9NWW6 199 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 FOXJ2Q9P0K8 574 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 TMEM184BQ9Y519 407 aaPredicted RBP25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 SLC22A7Q9Y694 548 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 MAU2Q9Y6X3 613 aa25.62■■□□□ 1.69
SH3GL3-205ENST00000563901 SPTBN2O15020 2390 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 KIAA0754O94854 1291 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 KLHL18O94889 574 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 KLK1P06870 262 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 ACSM2AQ08AH3 577 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 NDUFA9Q16795 377 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 FAM214AQ32MH5 1076 aa25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 LSM12Q3MHD2 195 aaKnown RBP25.61■■□□□ 1.69
SH3GL3-205ENST00000563901 SDK2Q58EX2 2172 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms