RNA–Protein interactions for RNA: ENST00000563845.5

KLHDC4-211, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 528 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-211ENST00000563845 HERC3Q15034 1050 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 TGFBIQ15582 683 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 FBXO42Q6P3S6 717 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 XKRXQ6PP77 449 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 SHISA6Q6ZSJ9 500 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 COX15Q7KZN9 410 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 TRMT10CQ7L0Y3 403 aaKnown RBP11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 CDH24Q86UP0 819 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 PLD3Q8IV08 490 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 LRRC56Q8IYG6 542 aaPredicted RBP11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 CATSPER1Q8NEC5 780 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 TRPV3Q8NET8 790 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 METTL21AQ8WXB1 218 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 CCT6BQ92526 530 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 KIAA1191Q96A73 305 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 SCYL1Q96KG9 808 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 ZNF285Q96NJ3 590 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 VPS11Q9H270 941 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 DNAJC11Q9NVH1 559 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 GPRC5BQ9NZH0 403 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 CTSFQ9UBX1 484 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 SEC14L3Q9UDX4 400 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 SLC22A14Q9Y267 594 aa11.35□□□□□ -0.59
KLHDC4-211ENST00000563845 KCNE1BA0A087WTH5 132 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 FEZF1A0PJY2 475 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ANKDD1BA6NHY2 528 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 H0YIG0 161 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 NDUFS4O43181 175 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CCNT2O60583 730 aaKnown RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 STK16O75716 305 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 FAM155BO75949 473 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 KLHL18O94889 574 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ONECUT2O95948 504 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CD1DP15813 335 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 NPPBP16860 134 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TFEBP19484 476 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CAPN3P20807 821 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 GSTM2P28161 218 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 GCGRP47871 477 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TNFSF10P50591 281 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 SMSP52788 366 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PGGT1BP53609 377 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 STXBP1P61764 594 aaKnown RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PHEXP78562 749 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TGM3Q08188 693 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 LAPTM5Q13571 262 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 DSG2Q14126 1118 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 EFTUD2Q15029 972 aaKnown RBP eCLIP11.34□□□□□ -0.593e-9■■□□□ 12.5
KLHDC4-211ENST00000563845 ZKSCAN8Q15776 578 aaPredicted RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PDK4Q16654 411 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PPP1R3AQ16821 1122 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TSNAXIP1Q2TAA8 658 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 HKDC1Q2TB90 917 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PRTGQ2VWP7 1150 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 NXPE4Q6UWF7 544 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 SPNS3Q6ZMD2 512 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CMC1Q7Z7K0 106 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 KBTBD2Q8IY47 623 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 MFSD9Q8NBP5 474 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 SUN3Q8TAQ9 357 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ZCCHC10Q8TBK6 192 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CHTF18Q8WVB6 975 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ANKRD49Q8WVL7 239 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 NEIL2Q969S2 332 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 UBE2E3Q969T4 207 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 FAR2Q96K12 515 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 OR2A5Q96R48 311 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TAAR6Q96RI8 345 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PAFAH2Q99487 392 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 PITHD1Q9GZP4 211 aaPredicted RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ALG9Q9H6U8 611 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 SNX15Q9NRS6 342 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 ABI3Q9P2A4 366 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 OPTCQ9UBM4 332 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 C19orf25Q9UFG5 118 aaPredicted RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 TMCO1Q9UM00 188 aa11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 MRPS2Q9Y399 296 aaKnown RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 INTS1Q8N201 2190 aaKnown RBP11.34□□□□□ -0.59
KLHDC4-211ENST00000563845 A0A096LPK6 155 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 A0A0A6YYC8 382 aaPredicted RBP11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 NSG1A0A0A6YYJ2 146 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 IGKV1-8A0A0C4DH67 115 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 IQANK1A0A1B0GTG1 560 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 I3L1I5 382 aaPredicted RBP11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 PSMD12O00232 456 aaPredicted RBP11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 KERAO60938 352 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 SMIM24O75264 130 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 RASAL1O95294 804 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 ESRRAP11474 423 aaPredicted RBP11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 AGAP20933 346 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 AHRP35869 848 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 PIK3CGP48736 1102 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 YBX1P67809 324 aaKnown RBP11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 Q0VFX4 171 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 PWP1Q13610 501 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 ACAP2Q15057 778 aa11.33□□□□□ -0.6
KLHDC4-211ENST00000563845 LRRC70Q7Z2Q7 622 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms