RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 DEFB126Q9BYW3 111 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 PRDM9Q9NQV7 894 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 PLSCR2Q9NRY7 297 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 TAS2R13Q9NYV9 303 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 ZFP69BQ9UJL9 534 aa17.46■□□□□ 0.39
NME3-204ENST00000563498 ZNF888P0CJ79 500 aaPredicted RBP17.45■□□□□ 0.38
NME3-204ENST00000563498 TFEBP19484 476 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 CHRNB4P30926 498 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 AHRP35869 848 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 AP1S2P56377 157 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 BTG2P78543 158 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 HSP90AA5PQ58FG0 334 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 CMPK2Q5EBM0 449 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 KIAA0408Q6ZU52 694 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 OR4K3Q96R72 315 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 NDNQ99608 321 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 TP63Q9H3D4 680 aaPredicted RBP17.45■□□□□ 0.38
NME3-204ENST00000563498 TNFRSF10DQ9UBN6 386 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 MAD1L1Q9Y6D9 718 aa17.45■□□□□ 0.38
NME3-204ENST00000563498 URADA6NGE7 173 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 GOLGA8MH3BSY2 632 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 PEX1O43933 1283 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 B3GALT4O96024 378 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 RNH1P13489 461 aaKnown RBP17.44■□□□□ 0.38
NME3-204ENST00000563498 MAOAP21397 527 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 CDC25BP30305 580 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 SCTRP47872 440 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 TFF3Q07654 80 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 TERF2Q15554 542 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 ARHGAP11AQ6P4F7 1023 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 PAQR3Q6TCH7 311 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 CEP128Q6ZU80 1094 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 AGGF1Q8N302 714 aaeCLIP17.44■□□□□ 0.38
NME3-204ENST00000563498 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
NME3-204ENST00000563498 APCDD1LQ8NCL9 501 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 C2CD4AQ8NCU7 369 aaPredicted RBP17.44■□□□□ 0.38
NME3-204ENST00000563498 ARMC2Q8NEN0 867 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 B3GNT7Q8NFL0 401 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 UTP15Q8TED0 518 aaKnown RBP17.44■□□□□ 0.38
NME3-204ENST00000563498 PYCR2Q96C36 320 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 SIGLEC10Q96LC7 697 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 NPDC1Q9NQX5 325 aaPredicted RBP17.44■□□□□ 0.38
NME3-204ENST00000563498 ARL15Q9NXU5 204 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 HRH3Q9Y5N1 445 aa17.44■□□□□ 0.38
NME3-204ENST00000563498 PABPN1LA6NDY0 278 aaKnown RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 USP27XA6NNY8 438 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 PSMD12O00232 456 aaPredicted RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 HS6ST1O60243 411 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 SERPIND1P05546 499 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 CLCN2P51788 898 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 TTC27Q6P3X3 843 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 ZNF662Q6ZS27 426 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 DMRTC2Q8IXT2 367 aaPredicted RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 CYP4Z2PQ8N1L4 340 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 TMEM156Q8N614 296 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 SLC5A11Q8WWX8 675 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 ATL1Q8WXF7 558 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 RND1Q92730 232 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 LINGO1Q96FE5 620 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 TRIM54Q9BYV2 358 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 SLC6A16Q9GZN6 736 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 IARS2Q9NSE4 1012 aaKnown RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 PPIEQ9UNP9 301 aaKnown RBP17.43■□□□□ 0.38
NME3-204ENST00000563498 RNF6Q9Y252 685 aa17.43■□□□□ 0.38
NME3-204ENST00000563498 CDC40O60508 579 aaKnown RBP eCLIP17.42■□□□□ 0.38
NME3-204ENST00000563498 TOXO94900 526 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 SMIM10L1P0DMW3 83 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 MSX1P28360 303 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 RFC3P40938 356 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 IL2P60568 153 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 CSHL1Q14406 222 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 CATSPEREQ5SY80 951 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 SPC24Q8NBT2 197 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 TRPV3Q8NET8 790 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 TRIM58Q8NG06 486 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 NEIL2Q969S2 332 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 FBXL8Q96CD0 374 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 SMIM10Q96HG1 83 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 SPNS1Q9H2V7 528 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 SLC24A3Q9HC58 644 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 KCNJ16Q9NPI9 418 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 TIMMDC1Q9NPL8 285 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 NECTIN3Q9NQS3 549 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 ZFATQ9P243 1243 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 KCNN3Q9UGI6 736 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 MMACHCQ9Y4U1 282 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 HCFC1P51610 2035 aa17.42■□□□□ 0.38
NME3-204ENST00000563498 TRBV11-1A0A0K0K1C0 115 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 ITGA10O75578 1167 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 TUBB4AP04350 444 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 ENO2P09104 434 aaPredicted RBP17.41■□□□□ 0.38
NME3-204ENST00000563498 GABRB3P28472 473 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 CXCR5P32302 372 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 CDKN2DP55273 166 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 RAB8AP61006 207 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 REEP5Q00765 189 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 HYAL2Q12891 473 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 PAOXQ6QHF9 649 aa17.41■□□□□ 0.38
NME3-204ENST00000563498 ACAD11Q709F0 780 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms