RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 EDIL3O43854 480 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PRDM1O75626 825 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 DFFBO76075 338 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 AP2A2O94973 939 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PTMAP06454 111 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GPIP06744 558 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 FAM157CP0CG43 387 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GP1BBP13224 206 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 AREGP15514 252 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GNB3P16520 340 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CCNA2P20248 432 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CALRP27797 417 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CHRNB4P30926 498 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 AKT2P31751 481 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 HNRNPFP52597 415 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CLDN17P56750 224 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 HUNKP57058 714 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 STARD6P59095 220 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC34A1Q06495 639 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 ARHGAP1Q07960 439 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GK2Q14410 553 aaPredicted RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CEBPEQ15744 281 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 EXT1Q16394 746 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM30BQ3MIR4 351 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 ARMCX4Q5H9R4 360 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 TOR1AIP1Q5JTV8 583 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 C20orf194Q5TEA3 1177 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GALNT17Q6IS24 598 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 KLHL10Q6JEL2 608 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC16A9Q7RTY1 509 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PIGZQ86VD9 579 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 STHQ8IWL8 128 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 LAX1Q8IWV1 398 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 GBP7Q8N8V2 638 aaPredicted RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 OR7A2PQ8NGA2 310 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 KIAA1524Q8TCG1 905 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 HPSE2Q8WWQ2 592 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PIK3R3Q92569 461 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 SEPT8Q92599 483 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 NXPE2Q96DL1 559 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CXorf58Q96LI9 332 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 C4orf45Q96LM5 186 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 BTBD9Q96Q07 612 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 LITAFQ99732 161 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PRMT1Q99873 361 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF577Q9BSK1 485 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 UBAC1Q9BSL1 405 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 RBM4Q9BWF3 364 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PITPNM3Q9BZ71 974 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 NACAP1Q9BZK3 213 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 C5orf66Q9H5L9 145 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 DCLRE1BQ9H816 532 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 LIN28AQ9H9Z2 209 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 PRMT8Q9NR22 394 aaPredicted RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 COPS7AQ9UBW8 275 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC12A6Q9UHW9 1150 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 POMT2Q9UKY4 750 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 SH3GLB1Q9Y371 365 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 CLCA3PQ9Y6N3 262 aa2.88□□□□□ -1.95
SHCBP1-202ENST00000563219 DHX29Q7Z478 1369 aaKnown RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 DISP3Q9P2K9 1392 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TRBV4-1A0A0J9YWV2 114 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CFAP73A6NFT4 308 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 ARHGAP42A6NI28 874 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC15A5A6NIM6 579 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC9B1P1A6NJY1 282 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 NPIPA3F8WFD2 350 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLCO1B7G3V0H7 640 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 KLF11O14901 512 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 MAGEB2O15479 319 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SMPD2O60906 423 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 AKR7A3O95154 331 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 STBD1O95210 358 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 PAK4O96013 591 aaPredicted RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SKILP12757 684 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CHRNA3P32297 505 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CNN1P51911 297 aaKnown RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CRIP2P52943 208 aaPredicted RBP2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 KCNK10P57789 538 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 KCNJ10P78508 379 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CDR2Q01850 454 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC3A1Q07837 685 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 KLHL30Q0D2K2 578 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TEAD2Q15562 447 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CARTPTQ16568 116 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 LRRC37A5PQ49AS3 106 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 GTDC1Q4AE62 458 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CCDC40Q4G0X9 1142 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 XKR6Q5GH73 641 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 CEP85LQ5SZL2 805 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 AGAP6Q5VW22 663 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM207Q6UWW9 146 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 OLFM4Q6UX06 510 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC24A5Q71RS6 500 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 NOTCH2NLQ7Z3S9 236 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 HDDC3Q8N4P3 179 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 TCEANCQ8N8B7 351 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 SLC37A3Q8NCC5 494 aa2.87□□□□□ -1.95
SHCBP1-202ENST00000563219 ZBTB44Q8NCP5 570 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms