RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FAM214AQ32MH5 1076 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 FBXO48Q5FWF7 155 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 PAGE2BQ5JRK9 111 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 VWA5B1Q5TIE3 1220 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 GTF2H2CQ6P1K8 395 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 KIRREL2Q6UWL6 708 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 ZYG11AQ6WRX3 759 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 PRSS58Q8IYP2 241 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 TEX9Q8N6V9 391 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 CCDC63Q8NA47 563 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 TTLQ8NG68 377 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 PNPLA2Q96AD5 504 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 MAGEB10Q96LZ2 347 aaPredicted RBP14.86□□□□□ -0.03
USB1-208ENST00000563207 ERVK-6Q9BXR3 956 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 TMBIM4Q9HC24 238 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 ASF1BQ9NVP2 202 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 FBXL4Q9UKA2 621 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 NTNG1Q9Y2I2 539 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 HS3ST3B1Q9Y662 390 aa14.86□□□□□ -0.03
USB1-208ENST00000563207 UQCRHLA0A096LP55 91 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 G3V2L1 256 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 H0YGG7 62 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 AGPSO00116 658 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 TYROBPO43914 113 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 WFS1O76024 890 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 AGFG2O95081 481 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 UQCRHP07919 91 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 RPS17P08708 135 aaKnown RBP14.85□□□□□ -0.03
USB1-208ENST00000563207 CPA3P15088 417 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 EPORP19235 508 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 DNAJB13P59910 316 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 ARF3P61204 181 aaPredicted RBP14.85□□□□□ -0.03
USB1-208ENST00000563207 REEP5Q00765 189 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 IRF8Q02556 426 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 Q0VFX4 171 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 ASPHQ12797 758 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 HIST2H2ACQ16777 129 aaPredicted RBP14.85□□□□□ -0.03
USB1-208ENST00000563207 XKR6Q5GH73 641 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 LIPJQ5W064 366 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 HIST2H2AA3Q6FI13 130 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 LAPTM4BQ86VI4 370 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 PARP9Q8IXQ6 854 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 TTC29Q8NA56 475 aaPredicted RBP14.85□□□□□ -0.03
USB1-208ENST00000563207 MFSD9Q8NBP5 474 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 CLEC1AQ8NC01 280 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 TCP10LQ8TDR4 215 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 UBE2E3Q969T4 207 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 L3HYPDHQ96EM0 354 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 FER1L6-AS2Q96M78 137 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 PCTPQ9UKL6 214 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 STK38LQ9Y2H1 464 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 ASB1Q9Y576 335 aa14.85□□□□□ -0.03
USB1-208ENST00000563207 NBPF19A0A087WUL8 3843 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 HYKKA2RU49 373 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 TM9SF1O15321 606 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 PRPF4O43172 522 aaKnown RBP eCLIP14.84□□□□□ -0.03
USB1-208ENST00000563207 OR1F1O43749 312 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 SPAG7O75391 227 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 SIX3O95343 332 aaPredicted RBP14.84□□□□□ -0.03
USB1-208ENST00000563207 ONECUT2O95948 504 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 MMP11P24347 488 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 HNF4AP41235 474 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 SCTRP47872 440 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 CHIT1Q13231 466 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 PWP1Q13610 501 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 NR6A1Q15406 480 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 CRB2Q5IJ48 1285 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ZNF678Q5SXM1 525 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 FHL5Q5TD97 284 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 AGBL2Q5U5Z8 902 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 GARNL3Q5VVW2 1013 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 TMIGD1Q6UXZ0 262 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 GOLGA7Q7Z5G4 137 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 CUZD1Q86UP6 607 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 CAMKVQ8NCB2 501 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 TRPV3Q8NET8 790 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 PRR7Q8TB68 274 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 PPP4R1Q8TF05 950 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ZNF483Q8TF39 744 aaPredicted RBP14.84□□□□□ -0.03
USB1-208ENST00000563207 SREK1Q8WXA9 508 aaKnown RBP14.84□□□□□ -0.03
USB1-208ENST00000563207 C8orf44Q96CB5 159 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 TM4SF19Q96DZ7 209 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 C10orf90Q96M02 699 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 C17orf62Q9BQA9 187 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 NTMT1Q9BV86 223 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ACBD3Q9H3P7 528 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 IPPKQ9H8X2 491 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ATP13A2Q9NQ11 1180 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 OXSMQ9NWU1 459 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ZFP69BQ9UJL9 534 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 B3GNT3Q9Y2A9 372 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 ESPL1Q14674 2120 aa14.84□□□□□ -0.03
USB1-208ENST00000563207 FEZF1A0PJY2 475 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 VSTM2BA6NLU5 285 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 H3BQF6 201 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 LCMT2O60294 686 aaKnown RBP14.83□□□□□ -0.04
USB1-208ENST00000563207 ZWINTO95229 277 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 MLYCDO95822 493 aa14.83□□□□□ -0.04
USB1-208ENST00000563207 STATHP02808 62 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms