RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ARHGEF9O43307 516 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 SELEP16581 610 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 COPB2P35606 906 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 CLK1P49759 484 aaKnown RBP4.73□□□□□ -1.65
LINC00557-201ENST00000563184 CLCN4P51793 760 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 GSCP56915 257 aaPredicted RBP4.73□□□□□ -1.65
LINC00557-201ENST00000563184 LRRC38Q5VT99 294 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 PRAMEF8Q5VWM4 474 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 SLC27A4Q6P1M0 643 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 KIF6Q6ZMV9 814 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 ASPGQ86U10 573 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 DND1Q8IYX4 353 aaKnown RBP4.73□□□□□ -1.65
LINC00557-201ENST00000563184 SLC22A15Q8IZD6 547 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 CCDC185Q8N715 623 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 BCL2L2Q92843 193 aaPredicted RBP4.73□□□□□ -1.65
LINC00557-201ENST00000563184 MED20Q9H944 212 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 RNPEPL1Q9HAU8 725 aa4.73□□□□□ -1.65
LINC00557-201ENST00000563184 ERRFI1Q9UJM3 462 aaPredicted RBP4.73□□□□□ -1.65
LINC00557-201ENST00000563184 IGLV7-46A0A075B6I9 117 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 hCG_38984A0A1B0GV85 526 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 GTPBP10A4D1E9 387 aaKnown RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 SRRM4A7MD48 611 aaKnown RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 LMO7DNF2Z398 122 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 LETM1O95202 739 aaPredicted RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 OAS2P29728 719 aaKnown RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 NME5P56597 212 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 HILS1P60008 231 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 IRX1P78414 480 aaPredicted RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 GPR50Q13585 617 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 MORF4L2Q15014 288 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 TCEAL6Q6IPX3 200 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 GSG1LQ6UXU4 331 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 MACC1Q6ZN28 852 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 ZNF497Q6ZNH5 498 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 C17orf107Q6ZR85 190 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 CHMP1BQ7LBR1 199 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 CHURC1Q8WUH1 139 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 PCDHB18PQ96TA0 734 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 WWTR1Q9GZV5 400 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 MTHFD2LQ9H903 347 aaPredicted RBP4.72□□□□□ -1.65
LINC00557-201ENST00000563184 ZDHHC18Q9NUE0 388 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 MIS18AQ9NYP9 233 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 SPG21Q9NZD8 308 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 LNPEPQ9UIQ6 1025 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 PLCL2Q9UPR0 1127 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 WIPI2Q9Y4P8 454 aa4.72□□□□□ -1.65
LINC00557-201ENST00000563184 MAGEB16A2A368 324 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 CCDC162PA2VCL2 907 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 M0R296 226 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SIGLEC5O15389 551 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 CRCPO75575 148 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 AKAP3O75969 853 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 C4BPBP20851 252 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 GJB2P29033 226 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 HUNKP57058 714 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 MAPK11Q15759 364 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 FAM189A2Q15884 450 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SGCBQ16585 318 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 FUT11Q495W5 492 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 ZER1Q7Z7L7 766 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 C10orf53Q8N6V4 93 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 ZNF713Q8N859 430 aaPredicted RBP4.71□□□□□ -1.66
LINC00557-201ENST00000563184 NUP37Q8NFH4 326 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 RNASE8Q8TDE3 154 aaKnown RBP4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SEPT8Q92599 483 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SLC35C1Q96A29 364 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 BPIFA2Q96DR5 249 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 LINC00479Q96M42 142 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SYT11Q9BT88 431 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 FGFBP2Q9BYJ0 223 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 OSBPL8Q9BZF1 889 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 SLC5A7Q9GZV3 580 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
LINC00557-201ENST00000563184 A0A1W2PRV1 198 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 K7EQD1 137 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 RNF103O00237 685 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 GRAP2O75791 330 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 CTNNA2P26232 953 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 PDHA2P29803 388 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 FEN1P39748 380 aaKnown RBP4.7□□□□□ -1.66
LINC00557-201ENST00000563184 CASP3P42574 277 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 SERPINH1P50454 418 aaKnown RBP4.7□□□□□ -1.66
LINC00557-201ENST00000563184 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
LINC00557-201ENST00000563184 SLC3A1Q07837 685 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 CNTN1Q12860 1018 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 CALCOCO2Q13137 446 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 FCN2Q15485 313 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 ACKR1Q16570 336 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 AARDQ4LEZ3 155 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 ZNF776Q68DI1 518 aaPredicted RBP4.7□□□□□ -1.66
LINC00557-201ENST00000563184 KCTD11Q693B1 232 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 ZNF613Q6PF04 617 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 Q6ZVQ6 151 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 SFRP1Q8N474 314 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 AQP11Q8NBQ7 271 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 RPLP0P6Q8NHW5 317 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 SMPDL3AQ92484 453 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 MOCOSQ96EN8 888 aa4.7□□□□□ -1.66
LINC00557-201ENST00000563184 PDLIM5Q96HC4 596 aaKnown RBP4.7□□□□□ -1.66
LINC00557-201ENST00000563184 PAPOLGQ9BWT3 736 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms