RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CDH2P19022 906 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 PRKACGP22612 351 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 HLCSP50747 726 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CYP4F2P78329 520 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 VLDLRP98155 873 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ROR2Q01974 943 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 LSAMPQ13449 338 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TEAD4Q15561 434 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 MLF2Q15773 248 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RFX4Q33E94 735 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 DEPDC1Q5TB30 811 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 MTSS1LQ765P7 747 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PIWIL3Q7Z3Z3 882 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 DCP2Q8IU60 420 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMG1-205ENST00000561947 LINC01555Q8NAE3 123 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 OR52N2Q8NGI0 321 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 MAL2Q969L2 176 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RIPOR3Q96MK2 946 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 C1QTNF7Q9BXJ2 289 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ZNF717Q9BY31 904 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 PITHD1Q9GZP4 211 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 BTBD1Q9H0C5 482 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ING2Q9H160 280 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 SLC6A17Q9H1V8 727 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 GPATCH2Q9NW75 528 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RAPGEFL1Q9UHV5 662 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TMEFF2Q9UIK5 374 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 KCNK6Q9Y257 313 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 HEATR5BQ9P2D3 2071 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 H7BY64 318 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 LATO43561 262 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 KCNJ13O60928 360 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 FKBP9O95302 570 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ELK4P28324 431 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 BSGP35613 385 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PIGAP37287 484 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CRATP43155 626 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CRYBA2P53672 197 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ADPRHP54922 357 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ESRRGP62508 458 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 COX20Q5RI15 118 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 GCNT6Q5T4J0 391 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 SDE2Q6IQ49 451 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ANGPTL8Q6UXH0 198 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 HORMAD1Q86X24 394 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ALDH16A1Q8IZ83 802 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CAMK1GQ96NX5 476 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PRAP1Q96NZ9 151 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 F2RL3Q96RI0 385 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 FBRSQ9HAH7 460 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 MIEF1Q9NQG6 463 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ADPRHL2Q9NX46 363 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TAS2R9Q9NYW1 312 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TAAR2Q9P1P5 351 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RSL24D1Q9UHA3 163 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 BAG5Q9UL15 447 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ORC6Q9Y5N6 252 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 A0A1W2PRB8 838 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 FEZF1A0PJY2 475 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 SUV39H1O43463 412 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ETFAP13804 333 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 COL9A1P20849 921 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 DNAJA1P31689 397 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 YAP1P46937 504 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 RAB28P51157 221 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ARHGDIAP52565 204 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RAD23AP54725 363 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TPD52P55327 224 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 ITGA1P56199 1179 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 CTBSQ01459 385 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 DLX2Q07687 328 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 ZC3H12BQ5HYM0 836 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 CWF19L1Q69YN2 538 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 CEP68Q76N32 757 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 PAGE2Q7Z2X7 111 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 GPR141Q7Z602 305 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 MMP21Q8N119 569 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 TPD52L3Q96J77 140 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 BARD1Q99728 777 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 APOOQ9BUR5 198 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 NPLQ9BXD5 320 aaPredicted RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 SLC6A16Q9GZN6 736 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 RAD21L1Q9H4I0 556 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 IMP3Q9NV31 184 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 LMCD1Q9NZU5 365 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 ACSL6Q9UKU0 697 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 WBP11Q9Y2W2 641 aaKnown RBP9.38□□□□□ -0.91
SMG1-205ENST00000561947 PLEKHM1Q9Y4G2 1056 aa9.38□□□□□ -0.91
SMG1-205ENST00000561947 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 MYO1GB0I1T2 1018 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 RTCAO00442 366 aaKnown RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 CAPN5O15484 640 aaPredicted RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 TBX19O60806 448 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 ADAM23O75077 832 aa9.37□□□□□ -0.91
SMG1-205ENST00000561947 GCM2O75603 506 aaPredicted RBP9.37□□□□□ -0.91
SMG1-205ENST00000561947 DIRAS1O95057 198 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms