RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PTDSS1P48651 473 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ERFP50548 548 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 CLNS1AP54105 237 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 UBE2IP63279 158 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 PRDX1Q06830 199 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 DDX39BQ13838 428 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 PDE7AQ13946 482 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 FLOT2Q14254 428 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZIC1Q15915 447 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 PRSS53Q2L4Q9 553 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 GTDC1Q4AE62 458 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 SPIN4Q56A73 249 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 RUNDC3AQ59EK9 446 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 XP32Q5T750 250 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 IRAK1BP1Q5VVH5 260 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF425Q6IV72 752 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LCN8Q6JVE9 175 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 TMIGD1Q6UXZ0 262 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LPCAT2Q7L5N7 544 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF551Q7Z340 670 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 COMMD6Q7Z4G1 85 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 UBE3DQ7Z6J8 389 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZBTB46Q86UZ6 589 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 C17orf64Q86WR6 236 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 CALHM3Q86XJ0 350 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 KBTBD2Q8IY47 623 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ADGRF3Q8IZF5 1079 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 FAM9CQ8IZT9 166 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LILRA2Q8N149 483 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 FBXL6Q8N531 539 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 TSTD1Q8NFU3 115 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 OR8J3Q8NGG0 315 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 OR8J2Q8NGG1 315 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 WDR48Q8TAF3 677 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 CREB3L4Q8TEY5 395 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 RLN3Q8WXF3 142 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 UBE2E3Q969T4 207 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 TBC1D20Q96BZ9 403 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 COQ8BQ96D53 544 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 REPS1Q96D71 796 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF583Q96ND8 569 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ANKRD27Q96NW4 1050 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 TSSK3Q96PN8 268 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 NELL2Q99435 816 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ZBTB18Q99592 522 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 CPPED1Q9BRF8 314 aaPredicted RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 INPP5KQ9BT40 448 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 GPR174Q9BXC1 333 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 RAB11FIP5Q9BXF6 653 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 EBPLQ9BY08 206 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 MS4A8Q9BY19 250 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 PCED1AQ9H1Q7 454 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 KCNH6Q9H252 994 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 SLC6A20Q9NP91 592 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LHX9Q9NQ69 397 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 IMP3Q9NV31 184 aaKnown RBP6.25□□□□□ -1.41
CAPN3-210ENST00000561817 SPHK1Q9NYA1 384 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 VAPAQ9P0L0 249 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 ATP6V1HQ9UI12 483 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 RIMS3Q9UJD0 308 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 USP22Q9UPT9 525 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 MAPRE3Q9UPY8 281 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 SIT1Q9Y3P8 196 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 LRRC42Q9Y546 428 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 HEBP2Q9Y5Z4 205 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 GMEB1Q9Y692 573 aa6.25□□□□□ -1.41
CAPN3-210ENST00000561817 C15orf38-AP3S2A0A0A6YYH1 394 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 TCRBV5S2A0A599 114 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 GABRR3A8MPY1 467 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 PDZK1P1A8MUH7 402 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 METTL12A8MUP2 240 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 H7BY64 318 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 K7ESF4 209 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 BTN3A3O00478 584 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 SCAMP2O15127 329 aaKnown RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 ZNF217O75362 1048 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 ERN1O75460 977 aaKnown RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 SEMA3DO95025 777 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 TGFB1P01137 390 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 C1QCP02747 245 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 LAMP1P11279 417 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 PIM1P11309 404 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 F3P13726 295 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 TCN1P20061 433 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 ALAS2P22557 587 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 HRH2P25021 359 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 PTX3P26022 381 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 HTR1BP28222 390 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 NDUFS1P28331 727 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 HTR1EP28566 365 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 SERPINB1P30740 379 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 S100A3P33764 101 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 BSGP35613 385 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 CDKN2CP42773 168 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 RPS9P46781 194 aaKnown RBP6.24□□□□□ -1.41
CAPN3-210ENST00000561817 RXRGP48443 463 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 CCR8P51685 355 aa6.24□□□□□ -1.41
CAPN3-210ENST00000561817 OR4D2P58180 307 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms