RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SMIM14Q96QK8 99 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 CPXM1Q96SM3 734 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 TBCBQ99426 244 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 THAP7Q9BT49 309 aaPredicted RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 RIOK2Q9BVS4 552 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 AP1M1Q9BXS5 423 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 HES7Q9BYE0 225 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 PRSS22Q9GZN4 317 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ATP13A3Q9H7F0 1226 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ZNF160Q9HCG1 818 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SYTL2Q9HCH5 934 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ACP6Q9NPH0 428 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 NRIP3Q9NQ35 241 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 SAMSN1Q9NSI8 373 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 SH3BP4Q9P0V3 963 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 ATXN10Q9UBB4 475 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 DHCR7Q9UBM7 475 aaKnown RBP3.53□□□□□ -1.84
HERC1-211ENST00000560983 OR12D3Q9UGF7 316 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 TRAF3IP3Q9Y228 551 aa3.53□□□□□ -1.84
HERC1-211ENST00000560983 CHD5Q8TDI0 1954 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SACSQ9NZJ4 4579 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 A0A1B0GTH9 108 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PVALEFA0A1B0GWK0 134 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 VSTM2BA6NLU5 285 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PDZK1P1A8MUH7 402 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CHUKO15111 745 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CD5LO43866 347 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 KLRC4O43908 158 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 DAB1O75553 588 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 USP1O94782 785 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 BMP10O95393 424 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MLYCDO95822 493 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 HRGP04196 525 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SERPINA7P05543 415 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ST6GAL1P15907 406 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CDK11BP21127 795 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 IL4RP24394 825 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PSMC2P35998 433 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 GABRA4P48169 554 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ALDH9A1P49189 494 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MXI1P50539 228 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 NR0B1P51843 470 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 FOXG1P55316 489 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 LOXL3P58215 753 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 YWHAEP62258 255 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 DEUP1Q05D60 604 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 TNK1Q13470 666 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CUL4BQ13620 913 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RPE65Q16518 533 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MEA1Q16626 185 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 NFIL3Q16649 462 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SLC25A52Q3SY17 297 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RAB6CQ53S08 254 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 THEMIS2Q5TEJ8 643 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SPINK14Q6IE38 97 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 TRNP1Q6NT89 227 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RWDD4Q6NW29 188 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 KLHL35Q6PF15 583 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SHC4Q6S5L8 630 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 TMEM108Q6UXF1 575 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SHISA6Q6ZSJ9 500 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CDHR3Q6ZTQ4 885 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 C11orf57Q6ZUT1 292 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 COX15Q7KZN9 410 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SLC26A9Q7LBE3 791 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 KRT73Q86Y46 540 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MDS2Q8NDY4 140 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RP9Q8TA86 221 aaKnown RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 SUN3Q8TAQ9 357 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ZFPM2Q8WW38 1151 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ZNF606Q8WXB4 792 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PIGTQ969N2 578 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 PERPQ96FX8 193 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SCMH1Q96GD3 660 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SIGLEC12Q96PQ1 595 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MCCC1Q96RQ3 725 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 TMEM79Q9BSE2 394 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 LRRC27Q9C0I9 530 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 SLC7A5P2Q9GIP4 190 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 RAB6CQ9H0N0 254 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CARD9Q9H257 536 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 BLZF1Q9H2G9 400 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CUEDC2Q9H467 287 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 OSGEPL1Q9H4B0 414 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 WDR54Q9H977 334 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 FANCEQ9HB96 536 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 FAM60AQ9NP50 221 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ARFGAP3Q9NP61 516 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 YAE1D1Q9NRH1 226 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 FAM207AQ9NSI2 230 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 SOHLH2Q9NX45 425 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.52□□□□□ -1.85
HERC1-211ENST00000560983 UBA2Q9UBT2 640 aaPredicted RBP3.52□□□□□ -1.85
HERC1-211ENST00000560983 TRIM10Q9UDY6 481 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 CNTN6Q9UQ52 1028 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 MTMR6Q9Y217 621 aa3.52□□□□□ -1.85
HERC1-211ENST00000560983 DNAJC16Q9Y2G8 782 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms