RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 ANKRD42Q8N9B4 389 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 C7orf57Q8NEG2 295 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 FAM76AQ8TAV0 307 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 MDM1Q8TC05 714 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SNRNP27Q8WVK2 155 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 SELENOMQ8WWX9 145 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 STON2Q8WXE9 905 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZNF75CPQ92670 426 aaPredicted RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 RGMAQ96B86 450 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 CLIP3Q96DZ5 547 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 FAR2Q96K12 515 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 C7orf26Q96N11 449 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SERINC2Q96SA4 455 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ILKAPQ9H0C8 392 aaPredicted RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 KLHL31Q9H511 634 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 CCDC134Q9H6E4 229 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ANKHQ9HCJ1 492 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZNF304Q9HCX3 659 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 STARD5Q9NSY2 213 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 TXLNGQ9NUQ3 528 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 VPS29Q9UBQ0 182 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 ZDHHC2Q9UIJ5 367 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 KCND3Q9UK17 655 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 NXT1Q9UKK6 140 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 WBP11Q9Y2W2 641 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 MRPS2Q9Y399 296 aaKnown RBP11.49□□□□□ -0.57
IRF9-211ENST00000560852 MAP4K5Q9Y4K4 846 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
IRF9-211ENST00000560852 SNRNP200O75643 2136 aaKnown RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 NCOR2Q9Y618 2525 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 A0A1W2PQ72 361 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 SLCO1B7G3V0H7 640 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 ITM2AO43736 263 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 ETHE1O95571 254 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 PDYNP01213 254 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 ACPPP15309 386 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 PCSK2P16519 638 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 BGNP21810 368 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 HMOX2P30519 316 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 BSGP35613 385 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 CCR10P46092 362 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 GSTM5P46439 218 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 AVPR1BP47901 424 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 RPL14P50914 215 aaKnown RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 NEK2P51955 445 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 RPS13P62277 151 aaKnown RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 CLN3Q13286 438 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 ABRAXAS2Q15018 415 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 KIAA0040Q15053 153 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 XKR7Q5GH72 579 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 OR4C11Q6IEV9 310 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 TRIM40Q6P9F5 258 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 FOXR1Q6PIV2 292 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 FAM198BQ6UWH4 519 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 Q6ZSR9 355 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 COX15Q7KZN9 410 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 CACNA2D3Q8IZS8 1091 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 CHTF18Q8WVB6 975 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 FCRL1Q96LA6 429 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 OR1F2PQ96R84 312 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 F2RL3Q96RI0 385 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 MTERF1Q99551 399 aaKnown RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 CENPKQ9BS16 269 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 TUBB1Q9H4B7 451 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 AKIRIN1Q9H9L7 192 aaPredicted RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 LYRM4Q9HD34 91 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 MKKSQ9NPJ1 570 aaPredicted RBP11.48□□□□□ -0.57
IRF9-211ENST00000560852 PFDN4Q9NQP4 134 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 ACSS2Q9NR19 701 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 AHSPQ9NZD4 102 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 KCMF1Q9P0J7 381 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 ANKRD12Q6UB98 2062 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 FREM2Q5SZK8 3169 aa11.48□□□□□ -0.57
IRF9-211ENST00000560852 KIF26BQ2KJY2 2108 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 BLACEA4D250 179 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 SYNDIG1LA6NDD5 238 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 C4orf51C9J302 202 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 SLC28A1O00337 649 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 PLPP1O14494 284 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 RSL1D1O76021 490 aaKnown RBP11.47□□□□□ -0.57
IRF9-211ENST00000560852 KLHL18O94889 574 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 TGFB1P01137 390 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 NEFHP12036 1026 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 HIST1H1TP22492 207 aaPredicted RBP11.47□□□□□ -0.57
IRF9-211ENST00000560852 ALAS2P22557 587 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 ATP5A1P25705 553 aaKnown RBP11.47□□□□□ -0.57
IRF9-211ENST00000560852 ATP1A2P50993 1020 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 MTTPP55157 894 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 TRA2BP62995 288 aaKnown RBP11.47□□□□□ -0.57
IRF9-211ENST00000560852 NCF4Q15080 339 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 TOR1AIP1Q5JTV8 583 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 TTC19Q6DKK2 380 aaPredicted RBP11.47□□□□□ -0.57
IRF9-211ENST00000560852 LCN10Q6JVE6 187 aa11.47□□□□□ -0.57
IRF9-211ENST00000560852 MYLK4Q86YV6 388 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms