RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 FAM83FQ8NEG4 500 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CDC26Q8NHZ8 85 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 VANGL1Q8TAA9 524 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TESCQ96BS2 214 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 BIRC7Q96CA5 298 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 SLITRK1Q96PX8 696 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ALOXE3Q9BYJ1 711 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TINAGL1Q9GZM7 467 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 SIRT3Q9NTG7 399 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ENOPH1Q9UHY7 261 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CACNG2Q9Y698 323 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CNTNAP2Q9UHC6 1331 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CNTNAP1P78357 1384 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HEATR9A2RTY3 570 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HMX2A2RU54 273 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 LINC00862A6NCI5 91 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TCAF2A6NFQ2 919 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF98A6NK75 572 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF487B1APH4 448 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TRDMT1O14717 391 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RRP8O43159 456 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 MED7O43513 233 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RGS10O43665 173 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 NRP2O60462 931 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 PLIN3O60664 434 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RAD17O75943 681 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RBP1P09455 135 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RAP2AP10114 183 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 FSTP19883 344 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HNRNPA2B1P22626 353 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 PSMA4P25789 261 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ERP29P30040 261 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CDKN1AP38936 164 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 NR2C2P49116 596 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 GP2P55259 537 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ENPEPQ07075 957 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 BAMBIQ13145 260 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 N4BP2L1Q5TBK1 243 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 NXNL2Q5VZ03 156 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 AFMIDQ63HM1 303 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CDC73Q6P1J9 531 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 XKRXQ6PP77 449 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP2R1Q6VVX0 501 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CREB3L2Q70SY1 520 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 AMZ2Q86W34 360 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 WFDC8Q8IUA0 241 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 C10orf107Q8IVU9 208 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 OR4M2Q8NGB6 313 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 OR4M1Q8NGD0 313 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC35B2Q8TB61 432 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 MAPK15Q8TD08 544 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 BPIFB1Q8TDL5 484 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CANT1Q8WVQ1 401 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 PABPC5Q96DU9 382 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CENPNQ96H22 339 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HIST1H2AHQ96KK5 128 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HSFY1Q96LI6 401 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 HIST1H2AJQ99878 128 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 DGCR6LQ9BY27 220 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ROGDIQ9GZN7 287 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RAB33BQ9H082 229 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 UPF3AQ9H1J1 476 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 MCCC2Q9HCC0 563 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ZBTB26Q9HCK0 441 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 ZFP14Q9HCL3 533 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 RAB20Q9NX57 234 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TRPS1Q9UHF7 1281 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 TRMT6Q9UJA5 497 aaKnown RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 STOML2Q9UJZ1 356 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 KLF2Q9Y5W3 355 aaPredicted RBP6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 CSNK1G3Q9Y6M4 447 aa6.48□□□□□ -1.37
TSPAN3-209ENST00000560715 A8MUA0 341 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PIK3R2O00459 728 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 EI24O14681 340 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 EIF3DO15371 548 aaKnown RBP eCLIP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ARHGEF9O43307 516 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DHHO43323 396 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 IFNA14P01570 189 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 AMHP03971 560 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MMP9P14780 707 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CSF2RAP15509 400 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 MAGP20916 626 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 ADH6P28332 368 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 AXLP30530 894 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 RPL9P32969 192 aaKnown RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 RPL22P35268 128 aaKnown RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 THBS4P35443 961 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 RPS9P46781 194 aaKnown RBP6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GNPDA1P46926 289 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 CLCNKAP51800 687 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 UCP2P55851 309 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GABARAPL2P60520 117 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 EFNB1P98172 346 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 SCRN3Q0VDG4 424 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 GPR50Q13585 617 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 DOC2AQ14183 400 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 NOTUMQ6P988 496 aa6.47□□□□□ -1.37
TSPAN3-209ENST00000560715 PM20D2Q8IYS1 436 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms