RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 KCNC4Q03721 635 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 Q0VFX4 171 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 IGFBP7Q16270 282 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 SLC6A19Q695T7 634 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 TRIM40Q6P9F5 258 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 CPEB2Q7Z5Q1 589 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 PLD6Q8N2A8 252 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 AFAP1L2Q8N4X5 818 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 CREB3L4Q8TEY5 395 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 GAL3ST3Q96A11 431 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 CNDP1Q96KN2 507 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 OR1F2PQ96R84 312 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 CCDC77Q9BR77 488 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 TUBB6Q9BUF5 446 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 REXO4Q9GZR2 422 aaKnown RBP12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 NT5DC2Q9H857 520 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZNF358Q9NW07 568 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 PTGFRNQ9P2B2 879 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZNF180Q9UJW8 692 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 B3GNT3Q9Y2A9 372 aa12.24□□□□□ -0.45
CTDSPL2-209ENST00000560620 SCN2AQ99250 2005 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 GCN1Q92616 2671 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 BSNQ9UPA5 3926 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 DNAJB6O75190 326 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SMIM24O75264 130 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SH3BGRLO75368 114 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 CLEC3AO75596 197 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ABHD2P08910 425 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 RBP1P09455 135 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 RNH1P13489 461 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 MTHFD2P13995 350 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 HNRNPH1P31943 449 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 CSRP3P50461 194 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 AP2B1P63010 937 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 TGM3Q08188 693 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 HYAL2Q12891 473 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 DDX39BQ13838 428 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SLC29A2Q14542 456 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 PCOLCEQ15113 449 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 TSNAXIP1Q2TAA8 658 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 BTBD16Q32M84 506 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 TECRLQ5HYJ1 363 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 MED27Q6P2C8 311 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 TMEM205Q6UW68 189 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ISLR2Q6UXK2 745 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ANKRD37Q7Z713 158 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 CYP4X1Q8N118 509 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SIRT6Q8N6T7 355 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 RBMXL3Q8N7X1 1067 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 BRIX1Q8TDN6 353 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 UBTD2Q8WUN7 234 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 UBLCP1Q8WVY7 318 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 UBE2E3Q969T4 207 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 PHF21BQ96EK2 531 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 SEC16BQ96JE7 1060 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 PTCHD1Q96NR3 888 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ACTR8Q9H981 624 aa12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZBTB20Q9HC78 741 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZNF490Q9ULM2 529 aaPredicted RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 TNPO3Q9Y5L0 923 aaKnown RBP12.23□□□□□ -0.45
CTDSPL2-209ENST00000560620 LOC102723996A0A087X1L8 192 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 IQANK1A0A1B0GTG1 560 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 LRIT2A6NDA9 550 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 LRRC14BA6NHZ5 514 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 B3GALT2O43825 422 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 PRMT3O60678 531 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 PRAMEF4O60810 478 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 VPS4BO75351 444 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 ZIC2O95409 532 aaPredicted RBP12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 SERPINA7P05543 415 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 CYC1P08574 325 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 COL6A2P12110 1019 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 EPORP19235 508 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 CD22P20273 847 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 CD97P48960 835 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 EFNA3P52797 238 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 OR4D2P58180 307 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 TBCCQ15814 346 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 SFT2D3Q587I9 215 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 PRAMEF9Q5VWM5 478 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 ADNP2Q6IQ32 1131 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 ATCAYQ86WG3 371 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 IQCKQ8N0W5 287 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 OR2L5Q8NG80 312 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 DNAJB14Q8TBM8 379 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 CPT1CQ8TCG5 803 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 MS4A6EQ96DS6 147 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 MTBPQ96DY7 904 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 WDR34Q96EX3 536 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 GPR78Q96P69 363 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 F2RL3Q96RI0 385 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 IPPKQ9H8X2 491 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 L2HGDHQ9H9P8 463 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 XPR1Q9UBH6 696 aa12.22□□□□□ -0.45
CTDSPL2-209ENST00000560620 TBK1Q9UHD2 729 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms