RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 SELENOKQ9Y6D0 94 aa4.81□□□□□ -1.64
MARK3-220ENST00000560417 URB2Q14146 1524 aaKnown RBP4.81□□□□□ -1.64
MARK3-220ENST00000560417 NEDD4P46934 1319 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 NKX6-3A6NJ46 265 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 NR5A2O00482 541 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 CLN5O75503 358 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 GRAP2O75791 330 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 MT-ND3P03897 115 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 MYOGP15173 224 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 ARF5P84085 180 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 GPR50Q13585 617 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 HNRNPDQ14103 355 aaKnown RBP4.8□□□□□ -1.64
MARK3-220ENST00000560417 ATP1A1-AS1Q5TC04 95 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 Q6ZRP5 223 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 TMEM126BQ8IUX1 230 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 RAB42Q8N4Z0 105 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 SMYD1Q8NB12 490 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 CLEC1AQ8NC01 280 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 PSMA8Q8TAA3 256 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 MAPK15Q8TD08 544 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 ST7LQ8TDW4 575 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 GGHQ92820 318 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 ZNF486Q96H40 463 aaPredicted RBP4.8□□□□□ -1.64
MARK3-220ENST00000560417 MAGED4Q96JG8 741 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 DPEP2Q9H4A9 486 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 FNDC4Q9H6D8 234 aaPredicted RBP4.8□□□□□ -1.64
MARK3-220ENST00000560417 TMOD3Q9NYL9 352 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 POMT2Q9UKY4 750 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 FOXA2Q9Y261 457 aaPredicted RBP4.8□□□□□ -1.64
MARK3-220ENST00000560417 WDR62O43379 1518 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 CUX2O14529 1486 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 MRC2Q9UBG0 1479 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 CEP164Q9UPV0 1460 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 PDS5BQ9NTI5 1447 aa4.8□□□□□ -1.64
MARK3-220ENST00000560417 C2orf92A0A1B0GVN3 265 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 TMEM129A0AVI4 362 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 SLC1A7O00341 560 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 VEGFDO43915 354 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 CEACAM4O75871 244 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 IGLV1-44P01699 117 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 SBK2P0C263 348 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 EDNRAP25101 427 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 HLA-FP30511 346 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 MTF1Q14872 753 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 FAM106AQ4KMX7 169 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 TCEAL6Q6IPX3 200 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 SLC27A4Q6P1M0 643 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 MACC1Q6ZN28 852 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 CCDC185Q8N715 623 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 RNF149Q8NC42 400 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 OR5T2Q8NGG2 359 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 OR6S1Q8NH40 331 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 SEPT8Q92599 483 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 ATP6V0A1Q93050 837 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 FAM46BQ96A09 425 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 OMA1Q96E52 524 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 ZNF300Q96RE9 604 aaPredicted RBP4.79□□□□□ -1.64
MARK3-220ENST00000560417 KRT12Q99456 494 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 IL12RB2Q99665 862 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 ASCL2Q99929 193 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 CCM2Q9BSQ5 444 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 CLEC7AQ9BXN2 247 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 TRIM7Q9C029 511 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 NAPBQ9H115 298 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 PLCXD1Q9NUJ7 323 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 TEX264Q9Y6I9 313 aa4.79□□□□□ -1.64
MARK3-220ENST00000560417 GLTPD2A6NH11 291 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 SRRM4A7MD48 611 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 RTCAO00442 366 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 MAGEB2O15479 319 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 EDIL3O43854 480 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 IGKV3-20P01619 116 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 OR1D2P34982 312 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 OPRL1P41146 370 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 YBEYP58557 167 aaPredicted RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 SNRPD1P62314 119 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 IRX4P78413 519 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 CBX3Q13185 183 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 LRRC37A5PQ49AS3 106 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 IFI44LQ53G44 452 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 PLPP4Q5VZY2 271 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 ZNF776Q68DI1 518 aaPredicted RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 C17orf107Q6ZR85 190 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 ZNF329Q86UD4 541 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 CATSPERDQ86XM0 798 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 SERPINA12Q8IW75 414 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 SLC22A15Q8IZD6 547 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 RTL3Q8N8U3 475 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 OR4D10Q8NGI6 311 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 DDX50Q9BQ39 737 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 WWTR1Q9GZV5 400 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 HOXD1Q9GZZ0 328 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 FGF22Q9HCT0 170 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 PRMT8Q9NR22 394 aaPredicted RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 CACNG5Q9UF02 275 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 PPP1R3CQ9UQK1 317 aa4.78□□□□□ -1.64
MARK3-220ENST00000560417 MRPS28Q9Y2Q9 187 aaKnown RBP4.78□□□□□ -1.64
MARK3-220ENST00000560417 CCDC162PA2VCL2 907 aa4.77□□□□□ -1.65
MARK3-220ENST00000560417 RNF103O00237 685 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms