RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 IGHG3P01860 377 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 CATP04040 527 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TUBB4AP04350 444 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 COILP38432 576 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 BTG2P78543 158 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 KLF1Q13351 362 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 KLHL38Q2WGJ6 581 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 KIAA0408Q6ZU52 694 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC26A11Q86WA9 606 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TMEM156Q8N614 296 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 CAMKVQ8NCB2 501 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 APCDD1LQ8NCL9 501 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 THAP11Q96EK4 314 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 COX4I2Q96KJ9 171 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 CALR3Q96L12 384 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 PTCHD1Q96NR3 888 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 SH3GL2Q99962 352 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 ATG10Q9H0Y0 220 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TIMMDC1Q9NPL8 285 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 ADAM21Q9UKJ8 722 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC22A7Q9Y694 548 aa11.92□□□□□ -0.5
RABGGTA-213ENST00000560127 TRBV11-1A0A0K0K1C0 115 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 A0A1B0GVC2 190 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 ERI2A8K979 691 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 A8MUA0 341 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 LCMT2O60294 686 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 B4GALT2O60909 372 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 ITGA10O75578 1167 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 GLSO94925 669 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 CD53P19397 219 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 FMO4P31512 558 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 DCAF7P61962 342 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 OLR1P78380 273 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 NKX6-1P78426 367 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 PLGLB1Q02325 96 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 C1orf185Q5T7R7 199 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 RIPPLY2Q5TAB7 128 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 THEMIS2Q5TEJ8 643 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 MEI1Q5TIA1 1274 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 PPP1R21Q6ZMI0 780 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 QSOX2Q6ZRP7 698 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 TRILQ7L0X0 811 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 ASPGQ86U10 573 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 SPNS2Q8IVW8 549 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 MPP5Q8N3R9 675 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 AFAP1L2Q8N4X5 818 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 RNF10Q8N5U6 811 aaKnown RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 RELL2Q8NC24 303 aaPredicted RBP11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 PSD4Q8NDX1 1056 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 OR2M7Q8NG81 312 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC13A3Q8WWT9 602 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 LPGAT1Q92604 370 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 CNPPD1Q9BV87 410 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 TTTY12Q9BZ98 90 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 CHRAC1Q9NRG0 131 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 KCMF1Q9P0J7 381 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 GUCA1BQ9UMX6 200 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 SH2B3Q9UQQ2 575 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 PPP2R2CQ9Y2T4 447 aa11.91□□□□□ -0.5
RABGGTA-213ENST00000560127 IGKV3D-11A0A0A0MRZ8 115 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 TCRBV16S1A1N1A0A5B0 115 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 ACOT7O00154 380 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 AQP7O14520 342 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 CHST10O43529 356 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 WDR1O75083 606 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 B3GALT4O96024 378 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 MAOAP21397 527 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 JAK1P23458 1154 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 HRH2P25021 359 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 TACR1P25103 407 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 IMPA1P29218 277 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 CLCN2P51788 898 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 NAP1L1P55209 391 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 RWDD2BP57060 319 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 PCBP2Q15366 365 aaKnown RBP eCLIP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 C16orf47Q6ZP98 133 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 PEX26Q7Z412 305 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 SLC22A16Q86VW1 577 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 CXorf67Q86X51 503 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 REXO1L1PQ8IX06 675 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 TMEM251Q8N6I4 163 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 FBXO15Q8NCQ5 510 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 PPHLN1Q8NEY8 458 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 LZTFL1Q9NQ48 299 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 NECTIN3Q9NQS3 549 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 TREX1Q9NSU2 369 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 BEX4Q9NWD9 120 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 B4GALT7Q9UBV7 327 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 ZNF223Q9UK11 482 aaPredicted RBP11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 FBXW2Q9UKT8 454 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 AMFRQ9UKV5 643 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 ANK2Q01484 3957 aa11.9□□□□□ -0.5
RABGGTA-213ENST00000560127 USF3Q68DE3 2245 aa11.9□□□□□ -0.51
RABGGTA-213ENST00000560127 MED12LQ86YW9 2145 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 INAFM1C9JVW0 142 aa11.89□□□□□ -0.51
RABGGTA-213ENST00000560127 G3V3Y1 287 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms