RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 GVINP1Q7Z2Y8 2422 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 WDFY3Q8IZQ1 3526 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CFAP54Q96N23 3096 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 LOC105369274A0A096LPK9 316 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 LOC102723532A0A0G2JNH3 316 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 A0A0J9YVX5 310 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 A0A0J9YY10 115 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SPAARA0A1B0GVQ0 90 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 MAGEB17A8MXT2 336 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 C9JVG2 144 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 E9PBE3 544 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RTCAO00442 366 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 SDHDO14521 159 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 FLRT2O43155 660 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ZW10O43264 779 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 DUX1O43812 170 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 DFNA5O60443 496 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 KLHL41O60662 606 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 DIAPH2O60879 1101 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CBFA2T3O75081 653 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RASSF9O75901 435 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CLDN9O95484 217 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ESRRBO95718 433 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 LDOC1O95751 146 aaPredicted RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 MLYCDO95822 493 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 TBX6O95947 436 aaPredicted RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 OTCP00480 354 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 GBAP04062 536 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SERPIND1P05546 499 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 EBLN1P0CF75 366 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 C1GALT1C1LP0DN25 315 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CKMT1AP12532 417 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 JUPP14923 745 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RAC2P15153 192 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 GRK2P25098 689 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CMPK1P30085 196 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HMOX2P30519 316 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HNRNPH1P31943 449 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 SERPINB5P36952 375 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HNF4AP41235 474 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 GRK6P43250 576 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ACADVLP49748 655 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RPL14P50914 215 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 CCR8P51685 355 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HK2P52789 917 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PKNOX1P55347 436 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 NME5P56597 212 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RPS13P62277 151 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 PRDX1Q06830 199 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 ASPHQ12797 758 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PRKAA1Q13131 559 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 TUBB3Q13509 450 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 KIR2DS3Q14952 304 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 NR1D2Q14995 579 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ARHGAP19Q14CB8 494 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 GPR19Q15760 415 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SLC5A12Q1EHB4 618 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HKDC1Q2TB90 917 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 GALNTL6Q49A17 601 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PRAMEF17Q5VTA0 474 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ATG9BQ674R7 924 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ZNF425Q6IV72 752 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ARMC6Q6NXE6 501 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 FIGLAQ6QHK4 219 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PRSS41Q7RTY9 318 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SPATA21Q7Z572 469 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 VN1R4Q7Z5H5 301 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 MTERF4Q7Z6M4 381 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 MCATQ8IVS2 390 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 OR4N4Q8N0Y3 316 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CNPY4Q8N129 248 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RAB42Q8N4Z0 105 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 AMER3Q8N944 861 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 L3MBTL4Q8NA19 623 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 FAM13CQ8NE31 585 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HUS1BQ8NHY5 278 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 ZCCHC10Q8TBK6 192 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 WDR20Q8TBZ3 569 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PIWIL2Q8TC59 973 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 METTL6Q8TCB7 284 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SREK1Q8WXA9 508 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 CCT6BQ92526 530 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 C19orf60Q96EN9 201 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PTCD3Q96EY7 689 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 CCDC74BQ96LY2 380 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 CCT8L2Q96SF2 557 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PRRX2Q99811 253 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HAUS8Q9BT25 410 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 C1orf50Q9BV19 199 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 NTMT1Q9BV86 223 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 RAB11FIP5Q9BXF6 653 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 MRPL1Q9BYD6 325 aaKnown RBP4.98□□□□□ -1.61
SPG11-220ENST00000559933 EPN3Q9H201 632 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 KLHL31Q9H511 634 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 UCK1Q9HA47 277 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 PELI2Q9HAT8 420 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SEMA3GQ9NS98 782 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 SOHLH2Q9NX45 425 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 TRPS1Q9UHF7 1281 aa4.98□□□□□ -1.61
SPG11-220ENST00000559933 HAO1Q9UJM8 370 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms