RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 NCF1P14598 390 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 ZNF10P21506 573 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 GGT5P36269 586 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 SLC6A12P48065 614 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 OLR1P78380 273 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 C2orf54Q08AI8 447 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 TOR1AIP1Q5JTV8 583 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 GRTP1Q5TC63 336 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 ZNF324BQ6AW86 544 aaPredicted RBP16.69■□□□□ 0.26
TPM1-218ENST00000559281 SLCO4C1Q6ZQN7 724 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 QSOX2Q6ZRP7 698 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 CYP4X1Q8N118 509 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 CREB3L4Q8TEY5 395 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 TSLPQ969D9 159 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 TAAR6Q96RI8 345 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 NT5DC2Q9H857 520 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 DNAJC11Q9NVH1 559 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 PCDHGB6Q9Y5F9 930 aa16.69■□□□□ 0.26
TPM1-218ENST00000559281 ICE1Q9Y2F5 2266 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 ANKDD1BA6NHY2 528 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 PHGDHO43175 533 aaKnown RBP16.68■□□□□ 0.26
TPM1-218ENST00000559281 DNAJB6O75190 326 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 STK16O75716 305 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 B3GALT4O96024 378 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 S100BP04271 92 aaPredicted RBP16.68■□□□□ 0.26
TPM1-218ENST00000559281 STSP08842 583 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 SLC26A5P58743 744 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 RAB10P61026 200 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 BTN3A2P78410 334 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 HYAL2Q12891 473 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 SLBPQ14493 270 aaKnown RBP eCLIP16.68■□□□□ 0.26
TPM1-218ENST00000559281 ZNF766Q5HY98 468 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 FCRLBQ6BAA4 426 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 SYT10Q6XYQ8 523 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 LGI4Q8N135 537 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 BEST3Q8N1M1 668 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 SPATA6LQ8N4H0 392 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 CCT6BQ92526 530 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 GAL3ST3Q96A11 431 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 NPLQ9BXD5 320 aaPredicted RBP16.68■□□□□ 0.26
TPM1-218ENST00000559281 RHBGQ9H310 441 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 EHD1Q9H4M9 534 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 KLHL31Q9H511 634 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 PRDM9Q9NQV7 894 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 CD274Q9NZQ7 290 aa16.68■□□□□ 0.26
TPM1-218ENST00000559281 HIVEP3Q5T1R4 2406 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 WISP3O95389 354 aaPredicted RBP16.67■□□□□ 0.26
TPM1-218ENST00000559281 CD46P15529 392 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 CD1DP15813 335 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 STX2P32856 288 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 MAGEA4P43358 317 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 TUBA3CQ13748 450 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 C18orf21Q32NC0 220 aaPredicted RBP16.67■□□□□ 0.26
TPM1-218ENST00000559281 TUBA3EQ6PEY2 450 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 GFRALQ6UXV0 394 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 RAPH1Q70E73 1250 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 CCDC25Q86WR0 208 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 CRLF3Q8IUI8 442 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM1-218ENST00000559281 AMER2Q8N7J2 671 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 STAG3L4Q8TBR4 150 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 KIAA1191Q96A73 305 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 UNKQ9C0B0 810 aaKnown RBP16.67■□□□□ 0.26
TPM1-218ENST00000559281 COPG2Q9UBF2 871 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 RNF112Q9ULX5 631 aa16.67■□□□□ 0.26
TPM1-218ENST00000559281 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.67■□□□□ 0.26
TPM1-218ENST00000559281 CTAGE15A4D2H0 777 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 LRIT2A6NDA9 550 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CLDN4O14493 209 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CLEC3AO75596 197 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 MLYCDO95822 493 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CRABP2P29373 138 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CD96P40200 585 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 GPX6P59796 221 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 BTG2P78543 158 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 OC90Q02509 493 aaPredicted RBP16.66■□□□□ 0.26
TPM1-218ENST00000559281 RBPJQ06330 500 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 NAB1Q13506 487 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 LAPTM5Q13571 262 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 RCN2Q14257 317 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 ZKSCAN8Q15776 578 aaPredicted RBP16.66■□□□□ 0.26
TPM1-218ENST00000559281 HIST2H2ACQ16777 129 aaPredicted RBP16.66■□□□□ 0.26
TPM1-218ENST00000559281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.66■□□□□ 0.269e-6■■■■□ 24.9
TPM1-218ENST00000559281 KBTBD12Q3ZCT8 623 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 PAGE2BQ5JRK9 111 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 HIST2H2AA3Q6FI13 130 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CTAGE6Q86UF2 777 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 RPS19BP1Q86WX3 136 aaKnown RBP16.66■□□□□ 0.26
TPM1-218ENST00000559281 PPM1NQ8N819 430 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 SNX31Q8N9S9 440 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 TMEM178AQ8NBL3 297 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 FBXO25Q8TCJ0 367 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 ELP5Q8TE02 316 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 ADAMTS18Q8TE60 1221 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 PTCD3Q96EY7 689 aaKnown RBP16.66■□□□□ 0.26
TPM1-218ENST00000559281 UBXN10Q96LJ8 280 aa16.66■□□□□ 0.26
TPM1-218ENST00000559281 CDCP1Q9H5V8 836 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms