RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 PITHD1Q9GZP4 211 aaPredicted RBP17.68■□□□□ 0.42
CASC4-209ENST00000559222 ZNF225Q9UK10 706 aa17.68■□□□□ 0.42
CASC4-209ENST00000559222 NXT1Q9UKK6 140 aaKnown RBP17.68■□□□□ 0.42
CASC4-209ENST00000559222 TMCO1Q9UM00 188 aa17.68■□□□□ 0.42
CASC4-209ENST00000559222 SAP18O00422 153 aaKnown RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 RTCAO00442 366 aaKnown RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 CHST10O43529 356 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 PLIN3O60664 434 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 CDC123O75794 336 aaPredicted RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 TGFB1P01137 390 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 PDGFAP04085 211 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 ATP5F1P24539 256 aaPredicted RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 PLA2G16P53816 162 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 BTN3A2P78410 334 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 KCNAB2Q13303 367 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 LAPTM5Q13571 262 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 RUNX2Q13950 521 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 RBBP7Q16576 425 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 CPSF6Q16630 551 aaKnown RBP eCLIP17.67■□□□□ 0.42
CASC4-209ENST00000559222 PAGE2BQ5JRK9 111 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 ZNF678Q5SXM1 525 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 LANCL3Q6ZV70 420 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 ABHD13Q7L211 337 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 LCA5Q86VQ0 697 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 SRRM1Q8IYB3 904 aaKnown RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 L3MBTL4Q8NA19 623 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 TTLQ8NG68 377 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 HUS1BQ8NHY5 278 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 SORBS1Q9BX66 1292 aaKnown RBP17.67■□□□□ 0.42
CASC4-209ENST00000559222 C1QTNF3Q9BXJ4 246 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 VN1R1Q9GZP7 353 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 ING2Q9H160 280 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 LANCL2Q9NS86 450 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 C14orf105Q9NVL8 296 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 DCDC2Q9UHG0 476 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 FBXL4Q9UKA2 621 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 BSNQ9UPA5 3926 aa17.67■□□□□ 0.42
CASC4-209ENST00000559222 DOCK10Q96BY6 2186 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 FAM227AF5H4B4 570 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 SPAG7O75391 227 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 ETHE1O95571 254 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 CD63P08962 238 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 CERS1P27544 350 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 CRHR1P34998 444 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 CCL11P51671 97 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 NEK2P51955 445 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 CCNG1P51959 295 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 EMP2P54851 167 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 STXBP1P61764 594 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 HERVK_113P63132 956 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 EEF1A2Q05639 463 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 RAPSNQ13702 412 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 ZRSR2Q15696 482 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 HIST2H2ACQ16777 129 aaPredicted RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 LIPJQ5W064 366 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 HIST2H2AA3Q6FI13 130 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 LETMD1Q6P1Q0 360 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 ZYG11AQ6WRX3 759 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 ZNF793Q6ZN11 406 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 APLFQ8IW19 511 aaPredicted RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 CA13Q8N1Q1 262 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 RIBC1Q8N443 379 aaPredicted RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 OR4F6Q8NGB9 312 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 TRPC4APQ8TEL6 797 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 WBP1Q96G27 269 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 ZIM3Q96PE6 472 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 MTERF1Q99551 399 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 ERVK-6Q9BXR3 956 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 REXO4Q9GZR2 422 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 OR51B5Q9H339 312 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 DMRT3Q9NQL9 472 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 MKL2Q9ULH7 1088 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 SETXQ7Z333 2677 aaKnown RBP17.66■□□□□ 0.42
CASC4-209ENST00000559222 PIEZO2Q9H5I5 2752 aa17.66■□□□□ 0.42
CASC4-209ENST00000559222 A6NL46 340 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 AGPSO00116 658 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 COPEO14579 308 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 TAC1P20366 129 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 GSTM2P28161 218 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 ARL1P40616 181 aaPredicted RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 PRKAA2P54646 552 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 RPS13P62277 151 aaKnown RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 Q0VFX4 171 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 KRT71Q3SY84 523 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 MINDY4Q4G0A6 757 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 COLEC12Q5KU26 742 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 TCHHL1Q5QJ38 904 aaPredicted RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 MFSD4BQ5TF39 518 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 METTL2BQ6P1Q9 378 aaKnown RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 ABHD17CQ6PCB6 329 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 BANPQ8N9N5 519 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 TMEM52Q8NDY8 209 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 OR2L5Q8NG80 312 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 OR11G2Q8NGC1 345 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 WDR20Q8TBZ3 569 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 TSLPQ969D9 159 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 ATP6V1E2Q96A05 226 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 MTFMTQ96DP5 389 aaKnown RBP17.65■□□□□ 0.42
CASC4-209ENST00000559222 ABHD17AQ96GS6 310 aa17.65■□□□□ 0.42
CASC4-209ENST00000559222 APOPT1Q96IL0 206 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms