RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 H2AFJQ9BTM1 129 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 PCBD2Q9H0N5 130 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 WDR54Q9H977 334 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 TXNDC16Q9P2K2 825 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 CGGBP1Q9UFW8 167 aaPredicted RBP5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 MRPS2Q9Y399 296 aaKnown RBP5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 OARD1Q9Y530 152 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 LRRK2Q5S007 2527 aa5.72□□□□□ -1.49
CTDSPL2-204ENST00000558966 RELNP78509 3460 aa5.71□□□□□ -1.49
CTDSPL2-204ENST00000558966 IGLV3-12A0A075B6K2 115 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KCNE1BA0A087WTH5 132 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRBV23-1A0A0A0MS06 115 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 HMX2A2RU54 273 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CTAGE15A4D2H0 777 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PABPN1LA6NDY0 278 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 VSTM2BA6NLU5 285 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KIF2AO00139 706 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SOCS6O14544 535 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 FFAR3O14843 346 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 GPR42O15529 346 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SUV39H1O43463 412 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 LCMT2O60294 686 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CEACAM4O75871 244 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KCNH1O95259 989 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TUBB4AP04350 444 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD63P08962 238 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CTAGE8P0CG41 777 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PIM1P11309 404 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 STMN1P16949 149 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SPRP35270 261 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC12A2P55011 1212 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CDKL1Q00532 357 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ILF2Q12905 390 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 NAB1Q13506 487 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 USP10Q14694 798 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SSPNQ14714 243 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 C18orf21Q32NC0 220 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 COLEC12Q5KU26 742 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 GARNL3Q5VVW2 1013 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SHISA6Q6ZSJ9 500 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PRSS41Q7RTY9 318 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ADAMTSL2Q86TH1 951 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CTAGE6Q86UF2 777 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CTAGE4Q8IX94 777 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 AMER3Q8N944 861 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MNS1Q8NEH6 495 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ABHD11Q8NFV4 315 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KIF18AQ8NI77 898 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ATL1Q8WXF7 558 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 NEIL2Q969S2 332 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 RERGQ96A58 199 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PTERQ96BW5 349 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 RHBDF1Q96CC6 855 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TSPAN17Q96FV3 270 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 Q96M66 194 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MACROD1Q9BQ69 325 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MESP1Q9BRJ9 268 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 HAUS8Q9BT25 410 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TRIM54Q9BYV2 358 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 DERL2Q9GZP9 239 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SPNS1Q9H2V7 528 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ZNF304Q9HCX3 659 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MLXIPLQ9NP71 852 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 P4HTMQ9NXG6 502 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 NINJ2Q9NZG7 142 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CTNNAL1Q9UBT7 734 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 EMC9Q9Y3B6 208 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PCDHGA9Q9Y5G4 932 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 HEMK1Q9Y5R4 338 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 HS3ST3B1Q9Y662 390 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ASH1LQ9NR48 2969 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 A0A0A6YYC8 382 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 PYCARD-AS1I3L0S3 204 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 I3L1I5 382 aaPredicted RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TXNDC9O14530 226 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC28A2O43868 658 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 ANXA5P08758 320 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC35E2BP0CK96 405 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCDC166P0CW27 439 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CD1DP15813 335 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 FBLP22087 321 aaKnown RBP5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MMP11P24347 488 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC26A3P40879 764 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLC6A12P48065 614 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 MASP1P48740 699 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CSRP3P50461 194 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCL11P51671 97 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 CCR8P51685 355 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 EFNA3P52797 238 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 RRADP55042 308 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 RAB10P61026 200 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 KLC1Q07866 573 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 DLG1Q12959 904 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SLMAPQ14BN4 828 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 TGFBIQ15582 683 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 OR4D1Q15615 310 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 SYT16Q17RD7 645 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 VWA2Q5GFL6 755 aa5.71□□□□□ -1.5
CTDSPL2-204ENST00000558966 DCAF10Q5QP82 559 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms