RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 SMYD1Q8NB12 490 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 TMEM178AQ8NBL3 297 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 MAPK15Q8TD08 544 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 U2AF1L4Q8WU68 220 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 GATAD1Q8WUU5 269 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SENP5Q96HI0 755 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 PCDHB18PQ96TA0 734 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 FUCA2Q9BTY2 467 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 MARCH7Q9H992 704 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 MAN2C1Q9NTJ4 1040 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 ZCCHC3Q9NUD5 404 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 INTS10Q9NVR2 710 aaKnown RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 DBF4Q9UBU7 674 aaPredicted RBP3.9□□□□□ -1.79
CASC4-206ENST00000558847 EPHA6Q9UF33 1036 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 UBQLN2Q9UHD9 624 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 CCPG1Q9ULG6 757 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 SATB2Q9UPW6 733 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 TMED7Q9Y3B3 224 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 UMODL1Q5DID0 1318 aa3.9□□□□□ -1.79
CASC4-206ENST00000558847 CCDC162PA2VCL2 907 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 C5orf51A6NDU8 294 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 MSGN1A6NI15 193 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SLC15A5A6NIM6 579 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SLC28A1O00337 649 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 ATP6V1G1O75348 118 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 MT-ND2P03891 347 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CYP3A5P20815 502 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CHRNB4P30926 498 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 HUNKP57058 714 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 KCNK10P57789 538 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 OR1D5P58170 312 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 IRX4P78413 519 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SP3Q02447 781 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 GABPAQ06546 454 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
CASC4-206ENST00000558847 PDE7AQ13946 482 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CEACAM7Q14002 265 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 TAB1Q15750 504 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SGSM1Q2NKQ1 1148 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 RFPL4BQ6ZWI9 263 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 TRMT11Q7Z4G4 463 aaKnown RBP3.89□□□□□ -1.79
CASC4-206ENST00000558847 APLFQ8IW19 511 aaPredicted RBP3.89□□□□□ -1.79
CASC4-206ENST00000558847 SERPINA12Q8IW75 414 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 TEX26Q8N6G2 289 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 TCEANCQ8N8B7 351 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CLEC1AQ8NC01 280 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 ANKRD20A12PQ8NF67 263 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 MRGPRDQ8TDS7 321 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SLC13A3Q8WWT9 602 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 HAS2Q92819 552 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CASP10Q92851 521 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 SLCO4A1Q96BD0 722 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 NXPE2Q96DL1 559 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 OMA1Q96E52 524 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 EPSTI1Q96J88 318 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 PRAM1Q96QH2 718 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 CCM2Q9BSQ5 444 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 DDX47Q9H0S4 455 aaKnown RBP3.89□□□□□ -1.79
CASC4-206ENST00000558847 C1orf21Q9H246 121 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 ATP13A3Q9H7F0 1226 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 MTHFD2LQ9H903 347 aaPredicted RBP3.89□□□□□ -1.79
CASC4-206ENST00000558847 WDR37Q9Y2I8 494 aa3.89□□□□□ -1.79
CASC4-206ENST00000558847 TRBV4-1A0A0J9YWV2 114 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MTMR11A4FU01 709 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 ARHGAP42A6NI28 874 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 CCDC69A6NI79 296 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 H0YIG0 161 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 CCSO14618 274 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MAGEB2O15479 319 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SYT7O43581 403 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SSX5O60225 188 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SAP30O75446 220 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 ALPPP05187 535 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 ALPPL2P10696 532 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 AREGP15514 252 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 CEBPBP17676 345 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 GAP43P17677 238 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MAPK3P27361 379 aaPredicted RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 NSFP46459 744 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 LUMP51884 338 aaPredicted RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 SMSP52788 366 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SSTP61278 116 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 GALK2Q01415 458 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 GAMTQ14353 236 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 PKN2Q16513 984 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 DUSP5Q16690 384 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 FAM106AQ4KMX7 169 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SNRNP48Q6IEG0 339 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 NEK5Q6P3R8 708 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 TDHQ8IZJ6 230 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 FBXW8Q8N3Y1 598 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 MRPL43Q8N983 215 aaKnown RBP3.88□□□□□ -1.79
CASC4-206ENST00000558847 LEMD2Q8NC56 503 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 TRIM58Q8NG06 486 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 OR13C5Q8NGS8 318 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 OR6S1Q8NH40 331 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 EXOC6Q8TAG9 804 aa3.88□□□□□ -1.79
CASC4-206ENST00000558847 SPATA18Q8TC71 538 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms