RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 CBX6O95503 412 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 FHP07954 510 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 SLC35E2BP0CK96 405 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 GNAZP19086 355 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 MAOAP21397 527 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
SMAD3-208ENST00000558827 STX2P32856 288 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 SOX11P35716 441 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 AHRP35869 848 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 HNMTP50135 292 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 PLA2G16P53816 162 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 ATP6V0D1P61421 351 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 RUNX2Q13950 521 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 DOC2AQ14183 400 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 TLR1Q15399 786 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 ZKSCAN8Q15776 578 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-208ENST00000558827 XKR6Q5GH73 641 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 SULT1C3Q6IMI6 304 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 PAPD4Q6PIY7 484 aaKnown RBP11.78□□□□□ -0.52
SMAD3-208ENST00000558827 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 TMIGD1Q6UXZ0 262 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 ABHD13Q7L211 337 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 KIF2BQ8N4N8 673 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 TRPV3Q8NET8 790 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 KIAA1191Q96A73 305 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 TBC1D20Q96BZ9 403 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 SARGQ9BW04 601 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 SLC6A16Q9GZN6 736 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 IGSF5Q9NSI5 407 aa11.78□□□□□ -0.52
SMAD3-208ENST00000558827 ZNF490Q9ULM2 529 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-208ENST00000558827 DIDO1Q9BTC0 2240 aaKnown RBP11.78□□□□□ -0.52
SMAD3-208ENST00000558827 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 ANKUB1A6NFN9 424 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 LRRC14BA6NHZ5 514 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 ERI3O43414 337 aaKnown RBP11.77□□□□□ -0.53
SMAD3-208ENST00000558827 ACSL3O95573 720 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 SMIM10L1P0DMW3 83 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 CD22P20273 847 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 CHIT1Q13231 466 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 WHAMMP3Q1A5X7 153 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 ABHD17BQ5VST6 288 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 CYS1Q717R9 158 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 VN1R5Q7Z5H4 357 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 TBC1D1Q86TI0 1168 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-208ENST00000558827 ISCA2Q86U28 154 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 RNF175Q8N4F7 328 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 SMIM10Q96HG1 83 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 UBXN10Q96LJ8 280 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 F2RL3Q96RI0 385 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 FAM129AQ9BZQ8 928 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 NECTIN3Q9NQS3 549 aa11.77□□□□□ -0.53
SMAD3-208ENST00000558827 C19orf25Q9UFG5 118 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-208ENST00000558827 PTBP2Q9UKA9 531 aaKnown RBP11.77□□□□□ -0.53
SMAD3-208ENST00000558827 HMX2A2RU54 273 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 ANKDD1BA6NHY2 528 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PSMD12O00232 456 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PRMT3O60678 531 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 WISP2O76076 250 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 C2P06681 752 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 SERPINA6P08185 405 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 LTA4HP09960 611 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PCNAP12004 261 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 RNH1P13489 461 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 EPORP19235 508 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PPP2R1BP30154 601 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 TSFMP43897 325 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 TNFSF10P50591 281 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 HNRNPFP52597 415 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PMP22Q01453 160 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 IRF8Q02556 426 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 ELOAQ14241 798 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PDK4Q16654 411 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 CLNKQ7Z7G1 428 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 CRLF3Q8IUI8 442 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 KLHDC8AQ8IYD2 350 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 BEST3Q8N1M1 668 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 KRT78Q8N1N4 520 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 TCAIMQ8N3R3 496 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 MMGT1Q8N4V1 131 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 FAM47BQ8NA70 645 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 TMEM52Q8NDY8 209 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 STAG3L4Q8TBR4 150 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 MS4A6EQ96DS6 147 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 FAR2Q96K12 515 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 TAAR6Q96RI8 345 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 LPAR4Q99677 370 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 NPAS2Q99743 824 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 HES7Q9BYE0 225 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 CD244Q9BZW8 370 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 VPS11Q9H270 941 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 CDCP1Q9H5V8 836 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 CNOT10Q9H9A5 744 aaKnown RBP11.76□□□□□ -0.53
SMAD3-208ENST00000558827 NMRAL1Q9HBL8 299 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 KLHL1Q9NR64 748 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 SNX15Q9NRS6 342 aa11.76□□□□□ -0.53
SMAD3-208ENST00000558827 PNO1Q9NRX1 252 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms