RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 ERVK-6Q9BXR3 956 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TDRD1Q9BXT4 1180 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SLC29A3Q9BZD2 475 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PNNQ9H307 717 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 DPEP2Q9H4A9 486 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TBC1D13Q9NVG8 400 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 WWOXQ9NZC7 414 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 C1RLQ9NZP8 487 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 AKAP7Q9P0M2 348 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ACTR3BQ9P1U1 418 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 BLOC1S6Q9UL45 172 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ENTPD4Q9Y227 616 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 RNF6Q9Y252 685 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PLEKHA6Q9Y2H5 1048 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 COLEC10Q9Y6Z7 277 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PDS5AQ29RF7 1337 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 KIF1BO60333 1816 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PBRM1Q86U86 1689 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 RANBP2P49792 3224 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PRSS51A0A1B0GVH4 220 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CTAGE9A4FU28 777 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CFAP73A6NFT4 308 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CGB1A6NKQ9 187 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 A8MVM7 634 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 H0Y8G0 127 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SLC28A2O43868 658 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CTAGE8P0CG41 777 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ETS1P14921 441 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CDH3P22223 829 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 GIFP27352 417 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PPP2R1BP30154 601 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CDKN2AP42771 156 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SULT1E1P49888 294 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 GAS1P54826 345 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PHEXP78562 749 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 RPL24P83731 157 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 AP1B1Q10567 949 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SRSF9Q13242 221 aaKnown RBP eCLIP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PPP2R5CQ13362 524 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 GCKRQ14397 625 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MEF2DQ14814 521 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 EFNB3Q15768 340 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PKN2Q16513 984 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 EIF2S3LQ2VIR3 472 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 GLIPR1L2Q4G1C9 344 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 NADSYN1Q6IA69 706 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMEM182Q6ZP80 229 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 C9orf47Q6ZRZ4 202 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 KCTD8Q6ZWB6 473 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TMUB2Q71RG4 321 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 NUP54Q7Z3B4 507 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 DGLUCYQ7Z3D6 616 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 AACSQ86V21 672 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 GPSM1Q86YR5 675 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CTAGE4Q8IX94 777 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZNF34Q8IZ26 560 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CENPLQ8N0S6 344 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MLKLQ8NB16 471 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZNF548Q8NEK5 533 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 OR4C15Q8NGM1 316 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 OR10T2Q8NGX3 314 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SPATA18Q8TC71 538 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SPPL2AQ8TCT8 520 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MRGPRDQ8TDS7 321 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SEPT8Q92599 483 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 FCGR1BQ92637 280 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PRCCQ92733 491 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CD101Q93033 1021 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SYAP1Q96A49 352 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MARK4Q96L34 752 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 POLDIP3Q9BY77 421 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 HOXD1Q9GZZ0 328 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SEBOXQ9HB31 216 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SDR39U1Q9NRG7 319 aaPredicted RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 C11orf21Q9P2W6 132 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 RHCGQ9UBD6 479 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 WDR37Q9Y2I8 494 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 STRAPQ9Y3F4 350 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MUC17Q685J3 4493 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 HEG1Q9ULI3 1381 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 A0A1B0GWJ7 208 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PLSCR5A0PG75 271 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MEI4A8MW99 385 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SLC1A7O00341 560 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SYT7O43581 403 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 PLPP2O43688 288 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 EXTL3O43909 919 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SELENOFO60613 162 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TPST2O60704 377 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 SLCO2B1O94956 709 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 NUDT14O95848 222 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 WDPCPO95876 746 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 TPM2P07951 284 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 FAM200BP0CF97 657 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 IGHV4-31P0DP07 118 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 MYOGP15173 224 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 CDKN1AP38936 164 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 KCNK10P57789 538 aa1.24□□□□□ -2.21
CTDSPL2-202ENST00000558373 ZXDBP98169 803 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms