RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 OR52B2Q96RD2 323 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SERINC2Q96SA4 455 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 EBF4Q9BQW3 602 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 NDC1Q9BTX1 674 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 FAIM2Q9BWQ8 316 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SLC7A5P2Q9GIP4 190 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 DDX31Q9H8H2 851 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 ANKHQ9HCJ1 492 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 FGF21Q9NSA1 209 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 LYARQ9NX58 379 aaKnown RBP11.82□□□□□ -0.52
TPM1-209ENST00000558072 ZIM2Q9NZV7 527 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 RARRES3Q9UL19 164 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 RP1P56715 2156 aa11.82□□□□□ -0.52
TPM1-209ENST00000558072 SNRNP200O75643 2136 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 ASXL3Q9C0F0 2248 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 GNG14A0A1W2PPG7 69 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 DCDC2BA2VCK2 349 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 SYNDIG1LA6NDD5 238 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 A8MU76 341 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 B4E171 279 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 E9PBE3 544 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 SLC30A4O14863 429 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 ERI3O43414 337 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 B3GALT2O43825 422 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 PCDH7O60245 1069 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 KLHL41O60662 606 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 OR2B3O76000 313 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 SCELO95171 688 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 PIM1P11309 404 aaPredicted RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 ALOX12P18054 663 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 PRPS1L1P21108 318 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 TSPAN7P41732 249 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 MTTPP55157 894 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 ZNF763Q0D2J5 394 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 LRRC74AQ0VAA2 488 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 TBL3Q12788 808 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 HEPACAMQ14CZ8 416 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 KIAA0040Q15053 153 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 PRTGQ2VWP7 1150 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 RFTN2Q52LD8 501 aaPredicted RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 CCNYL2Q5T2Q4 361 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 IL23RQ5VWK5 629 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 FAM91A1Q658Y4 838 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 TMEM214Q6NUQ4 689 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 PRMT9Q6P2P2 845 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 ABHD17CQ6PCB6 329 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 ZNF574Q6ZN55 896 aaPredicted RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 COMMD6Q7Z4G1 85 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 VN1R5Q7Z5H4 357 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 VN1R4Q7Z5H5 301 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 B3GNT8Q7Z7M8 397 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 C1orf52Q8N6N3 182 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 OR2T11Q8NH01 316 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 CMTM5Q96DZ9 223 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 MTERF3Q96E29 417 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 F2RL3Q96RI0 385 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 HBEGFQ99075 208 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 BRINP2Q9C0B6 783 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 WDR41Q9HAD4 459 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 FAM60AQ9NP50 221 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 FBXO8Q9NRD0 319 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 AIG1Q9NVV5 245 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 PHF11Q9UIL8 331 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 CDV3Q9UKY7 258 aaKnown RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
TPM1-209ENST00000558072 EP300Q09472 2414 aaPredicted RBP11.81□□□□□ -0.52
TPM1-209ENST00000558072 HYKKA2RU49 373 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 PMS2P1A4D2B8 440 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 TMEM150CB9EJG8 249 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 H0YIG0 161 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 TM4SF5O14894 197 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 HNRNPCL1O60812 293 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 ATP5HO75947 161 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 JUNP05412 331 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 ANXA4P09525 319 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 DRD2P14416 443 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 IL10P22301 178 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 HIST1H1TP22492 207 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 PRDX6P30041 224 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 HPCAL1P37235 193 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 PLA2G5P39877 138 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 GABRA4P48169 554 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 NOVA1P51513 510 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 MAPK12P53778 367 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 SRSF11Q05519 484 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 TUBB3Q13509 450 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 TMEM164Q5U3C3 297 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 CDCP2Q5VXM1 449 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 DHRS13Q6UX07 377 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 TRPM8Q7Z2W7 1104 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 MTDHQ86UE4 582 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 TMPRSS12Q86WS5 348 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 PPP1R3BQ86XI6 285 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 SAMD14Q8IZD0 417 aaPredicted RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 GALNT15Q8N3T1 639 aa11.8□□□□□ -0.52
TPM1-209ENST00000558072 UTP15Q8TED0 518 aaKnown RBP11.8□□□□□ -0.52
TPM1-209ENST00000558072 FAM122AQ96E09 287 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms