RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SPTY2D1-AS1A0A0U1RR47 76 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 A0A1W2PPZ6 126 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 METTL12A8MUP2 240 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 K7ESF4 209 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 BTN3A3O00478 584 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 NDUFB5O43674 189 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SCN2BO60939 215 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 FKBP6O75344 327 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ANP32DO95626 131 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 NPPAP01160 153 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 C1QCP02747 245 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 IL6P05231 212 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 C8BP07358 591 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 CHRM5P08912 532 aaPredicted RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 HSD17B1P14061 328 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PRPS1L1P21108 318 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ATP6V1B2P21281 511 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 MAPK1P28482 360 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PTPN6P29350 595 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 TIA1P31483 386 aaKnown RBP eCLIP7.05□□□□□ -1.28
SPG11-204ENST00000557866 S100A3P33764 101 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 NUDT1P36639 197 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 CDKN2CP42773 168 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PTDSS1P48651 473 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 CLNS1AP54105 237 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 UBE2IP63279 158 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 CYP4F2P78329 520 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 LIPEQ05469 1076 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SLC34A1Q06495 639 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PRDX1Q06830 199 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 ACSM2AQ08AH3 577 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 DMWDQ09019 674 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 TRAP1Q12931 704 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 FLOT2Q14254 428 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 TRIM25Q14258 630 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 RBBP5Q15291 538 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 CCDC6Q16204 474 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 HIST2H2ACQ16777 129 aaPredicted RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 PRSS53Q2L4Q9 553 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 HKDC1Q2TB90 917 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ZNF385BQ569K4 471 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 C10orf62Q5T681 223 aaPredicted RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 ACSM2BQ68CK6 577 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 HIST2H2AA3Q6FI13 130 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ANKRD26P1Q6NSI1 321 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 GALNT18Q6P9A2 607 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 IYDQ6PHW0 289 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 LPCAT2Q7L5N7 544 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 COMMD6Q7Z4G1 85 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 UBE3DQ7Z6J8 389 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SYT12Q8IV01 421 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PLD3Q8IV08 490 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 KRT78Q8N1N4 520 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SPEM1Q8N4L4 309 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 BHLHE22Q8NFJ8 381 aaPredicted RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 PJA1Q8NG27 643 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 OR4E2Q8NGC2 313 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 FLVCR1-AS1Q8TAF5 88 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 CREB3L4Q8TEY5 395 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PATE1Q8WXA2 126 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SNX19Q92543 992 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 STMN2Q93045 179 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 UBE2E3Q969T4 207 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SLCO4A1Q96BD0 722 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ASB9Q96DX5 294 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 PPM1MQ96MI6 270 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 OR52E6Q96RD3 313 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 CITED4Q96RK1 184 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 AIF1LQ9BQI0 150 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 SORBS1Q9BX66 1292 aaKnown RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 RAB11FIP5Q9BXF6 653 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 MS4A8Q9BY19 250 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 ZNF717Q9BY31 904 aaPredicted RBP7.05□□□□□ -1.28
SPG11-204ENST00000557866 AICDAQ9GZX7 198 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 IKZF5Q9H5V7 419 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 NT5DC2Q9H857 520 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 LHX9Q9NQ69 397 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 VAPAQ9P0L0 249 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 TAAR2Q9P1P5 351 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 HEBP2Q9Y5Z4 205 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 COLEC10Q9Y6Z7 277 aa7.05□□□□□ -1.28
SPG11-204ENST00000557866 LOC100289279A0A1B0GTE1 492 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PRSS51A0A1B0GVH4 220 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 TCRBV3S1A0A5B6 114 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 GABRR3A8MPY1 467 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 RTCAO00442 366 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 PLPP1O14494 284 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 SCAMP2O15127 329 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 PPM1DO15297 605 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PCDH7O60245 1069 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 MYO1DO94832 1006 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 BAG2O95816 211 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 GBAP04062 536 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 KLK1P06870 262 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 DCNP07585 359 aaKnown RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 ANXA4P09525 319 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 LAMP1P11279 417 aa7.04□□□□□ -1.28
SPG11-204ENST00000557866 PIM1P11309 404 aaPredicted RBP7.04□□□□□ -1.28
SPG11-204ENST00000557866 F3P13726 295 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms