RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, human

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-233	ENST00000557529	FASLG	P48023	281 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	CSNK1E	P49674	416 aa	Known RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	ATXN3	P54252	364 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	STXBP1	P61764	594 aa	Known RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	KLC1	Q07866	573 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	RGS1	Q08116	209 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	DMWD	Q09019	674 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	SIM2	Q14190	667 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	SELPLG	Q14242	412 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	HEPACAM	Q14CZ8	416 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	ANKRD26P1	Q6NSI1	321 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	FIGLA	Q6QHK4	219 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	LRRC74B	Q6ZQY2	392 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	UBE3D	Q7Z6J8	389 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR2L5	Q8NG80	312 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	NT5C	Q8TCD5	201 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	KCNC2	Q96PR1	638 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	PHF12	Q96QT6	1004 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	TBCD	Q9BTW9	1192 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	EFHD1	Q9BUP0	239 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	SORBS1	Q9BX66	1292 aa	Known RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	TRIM8	Q9BZR9	551 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	CAAP1	Q9H8G2	361 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	CD320	Q9NPF0	282 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	MIEF1	Q9NQG6	463 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	HRASLS2	Q9NWW9	162 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	PCDHGB4	Q9UN71	923 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	EXO1	Q9UQ84	846 aa	Known RBP	11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529	KLHL20	Q9Y2M5	609 aa		11.91	□□□□□ -0.5
SHMT2-233	ENST00000557529		A0A0J9YY10	115 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR5K3	A6NET4	321 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	LILRA5	A6NI73	299 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	RTCA	O00442	366 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	YY2	O15391	372 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ERI3	O43414	337 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	GUCY1B2	O75343	617 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	CPSF4	O95639	269 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	DDC	P20711	480 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	MAG	P20916	626 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ATP6V1B2	P21281	511 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	SLC7A1	P30825	629 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	CDKN2C	P42773	168 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	FNTB	P49356	437 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	PLA2G16	P53816	162 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ABHD18	Q0P651	414 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	BIRC2	Q13490	618 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	GTDC1	Q4AE62	458 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	MTX3	Q5HYI7	312 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	TOR1AIP1	Q5JTV8	583 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	TRIM40	Q6P9F5	258 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ABHD17C	Q6PCB6	329 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	CYP2R1	Q6VVX0	501 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZNF621	Q6ZSS3	439 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ASPG	Q86U10	573 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	TRIM73	Q86UV7	250 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	TMEM126B	Q8IUX1	230 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ARL14	Q8N4G2	192 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	OR2T12	Q8NG77	320 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	EDA	Q92838	391 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	MIEF2	Q96C03	454 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	TM4SF18	Q96CE8	201 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	MS4A6E	Q96DS6	147 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	FAM120B	Q96EK7	910 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZNF583	Q96ND8	569 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	SLC6A16	Q9GZN6	736 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ROGDI	Q9GZN7	287 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	VCX3B	Q9H321	246 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	KAT8	Q9H7Z6	458 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ERVMER34-1	Q9H9K5	563 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	LHX9	Q9NQ69	397 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	GMPR2	Q9P2T1	348 aa	Known RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	EGFL7	Q9UHF1	273 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	VPS4A	Q9UN37	437 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	CORO2B	Q9UQ03	480 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	BTBD3	Q9Y2F9	522 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529	GMEB1	Q9Y692	573 aa		11.9	□□□□□ -0.5
SHMT2-233	ENST00000557529		A0A0A6YYD5	115 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529		A0A1B0GTW7	788 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	FAM220BP	B1ANY3	271 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	GSTA4	O15217	222 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	LAMTOR5	O43504	91 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	GPR37L1	O60883	481 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	PIAS2	O75928	621 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	PDGFB	P01127	241 aa	Predicted RBP	11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	GSN	P06396	782 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	GPI	P06744	558 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	SLC35G6	P0C7Q6	338 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	UMPS	P11172	480 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	DRD2	P14416	443 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	GNS	P15586	552 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	MAZ	P56270	477 aa	Known RBP	11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	OR4D2	P58180	307 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	HYAL2	Q12891	473 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	SLC9A5	Q14940	896 aa		11.89	□□□□□ -0.51
SHMT2-233	ENST00000557529	ZNF385B	Q569K4	471 aa		11.89	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms