RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 KCNE2Q9Y6J6 123 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 HSPE1-MOB4S4R3N1 261 aa17■□□□□ 0.31
XRCC3-218ENST00000557439 ANTXRLA6NF34 631 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 KLK1P06870 262 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 STSP08842 583 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ADRA2AP08913 450 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PCGF2P35227 344 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 TAS2R50P59544 299 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 WDR5P61964 334 aaKnown RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 C2orf80Q0P641 193 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 SLC5A12Q1EHB4 618 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PARS2Q7L3T8 475 aaKnown RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ANKRD33Q7Z3H0 272 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 TRAPPC5Q8IUR0 188 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 LGI4Q8N135 537 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 GGHQ92820 318 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 VMP1Q96GC9 406 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 EPYCQ99645 322 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ROGDIQ9GZN7 287 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 MIR1-1HGQ9H1L0 117 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ZDHHC4Q9NPG8 344 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 SACM1LQ9NTJ5 587 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PCYT1BQ9Y5K3 369 aaPredicted RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PRAMEF33A0A0G2JMD5 474 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 LOC100506127A0A0U1RQW1 187 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PRAMEF10O60809 474 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 AP2A2O94973 939 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 C1orf105O95561 183 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 MAGP20916 626 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ASMTP46597 345 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PRLHRP49683 370 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 CLK1P49759 484 aaKnown RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 ERVFC1P60507 584 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 KCNC3Q14003 757 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 SCARB2Q14108 478 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 HIST2H2ACQ16777 129 aaPredicted RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 INAVAQ3KP66 663 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 CPA6Q8N4T0 437 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 SVOPQ8N4V2 548 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 KLHL23Q8NBE8 558 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 PSMA8Q8TAA3 256 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 MROQ9BYG7 248 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 WDR12Q9GZL7 423 aaKnown RBP16.99■□□□□ 0.31
XRCC3-218ENST00000557439 DCSTAMPQ9H295 470 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 TDP1Q9NUW8 608 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 IL36AQ9UHA7 158 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 USP34Q70CQ2 3546 aa16.99■□□□□ 0.31
XRCC3-218ENST00000557439 WASH3PC4AMC7 463 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 TNFRSF21O75509 655 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 DBTP11182 482 aaKnown RBP16.98■□□□□ 0.31
XRCC3-218ENST00000557439 CARTPTQ16568 116 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 TCEAL5Q5H9L2 206 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 CACTIN-AS1Q8N1I8 211 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 ATL1Q8WXF7 558 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 REEP4Q9H6H4 257 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 BRF2Q9HAW0 419 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF226Q9NYT6 803 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 PADI2Q9Y2J8 665 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 KPNA4O00629 521 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-218ENST00000557439 PRIM2P49643 509 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 HNRNPFP52597 415 aaKnown RBP16.98■□□□□ 0.31
XRCC3-218ENST00000557439 DOC2BQ14184 412 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 SPIN4Q56A73 249 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 FAM43BQ6ZT52 329 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-218ENST00000557439 SLC44A2Q8IWA5 706 aaPredicted RBP16.98■□□□□ 0.31
XRCC3-218ENST00000557439 GABARAPL3Q9BY60 117 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 C5AR2Q9P296 337 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 RAB23Q9ULC3 237 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 LRRK1Q38SD2 2015 aa16.98■□□□□ 0.31
XRCC3-218ENST00000557439 PIPSLA2A3N6 862 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 RTCAO00442 366 aaKnown RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 HSMCR30P0CW71 290 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 IMPDH2P12268 514 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 GGT2P36268 569 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 DCDC1P59894 354 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF763Q0D2J5 394 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 SLC13A2Q13183 592 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 RPS26P11Q5JNZ5 115 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 COLEC12Q5KU26 742 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ANXA8L1Q5VT79 327 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 TRMT11Q7Z4G4 463 aaKnown RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 CADM3Q8N126 398 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ZBTB8BQ8NAP8 495 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 MCFD2Q8NI22 146 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ITPAQ9BY32 194 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ABCG4Q9H172 646 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 OR51E2Q9H255 320 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 ZNF282Q9UDV7 671 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 PSORS1C1Q9UIG5 152 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 TBX21Q9UL17 535 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 RNASET2O00584 256 aaKnown RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 AIREO43918 545 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 PTHP01270 115 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 FURINP09958 794 aa16.97■□□□□ 0.31
XRCC3-218ENST00000557439 HOXB6P17509 224 aaKnown RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 TPP2P29144 1249 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 CHI3L1P36222 383 aaPredicted RBP16.97■□□□□ 0.31
XRCC3-218ENST00000557439 MMP12P39900 470 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms