RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SIGLEC10Q96LC7 697 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 PCBD2Q9H0N5 130 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 PARVBQ9HBI1 364 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 ZNF223Q9UK11 482 aaPredicted RBP13.17□□□□□ -0.3
SLIRP-210ENST00000557431 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
SLIRP-210ENST00000557431 NAV3Q8IVL0 2385 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 MYOCOSA0A1B0GUC4 107 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 PRKNO60260 465 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-210ENST00000557431 PRMT3O60678 531 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 C8GP07360 202 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 TFEBP19484 476 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 CCR8P51685 355 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 HERC3Q15034 1050 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 ANKRD53Q8N9V6 530 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLIRP-210ENST00000557431 FAM57AQ8TBR7 257 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 NEIL2Q969S2 332 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 TMEM125Q96AQ2 219 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 SNF8Q96H20 258 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 OLFM1Q99784 485 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 DEFB126Q9BYW3 111 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 DEFB127Q9H1M4 99 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 COQ3Q9NZJ6 369 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 RNF6Q9Y252 685 aa13.16□□□□□ -0.3
SLIRP-210ENST00000557431 ZNF469Q96JG9 3925 aaPredicted RBP13.16□□□□□ -0.3
SLIRP-210ENST00000557431 A0A0G2JMM0 328 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 A0A1W2PPB8 328 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 A0A1W2PRS3 328 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 TRBC2A0A5B9 178 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 KIR3DP1A8MWS1 328 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 G3V3Y1 287 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 NRDCO43847 1150 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 PEX1O43933 1283 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 JAK1P23458 1154 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 MAGEA3P43357 314 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 RGS4P49798 205 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 HLCSP50747 726 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 HNRNPFP52597 415 aaKnown RBP13.15□□□□□ -0.3
SLIRP-210ENST00000557431 TOR1AIP1Q5JTV8 583 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 UGT3A1Q6NUS8 523 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 QSOX2Q6ZRP7 698 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 TMPRSS11BQ86T26 416 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 PALM2Q8IXS6 379 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 LGI4Q8N135 537 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 CYP4Z2PQ8N1L4 340 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 CA13Q8N1Q1 262 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 C2CD4AQ8NCU7 369 aaPredicted RBP13.15□□□□□ -0.3
SLIRP-210ENST00000557431 MCUQ8NE86 351 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 ABHD11Q8NFV4 315 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 OR56A3Q8NH54 315 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 MAGOHBQ96A72 148 aaKnown RBP13.15□□□□□ -0.3
SLIRP-210ENST00000557431 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
SLIRP-210ENST00000557431 PNO1Q9NRX1 252 aaKnown RBP13.15□□□□□ -0.3
SLIRP-210ENST00000557431 DEPPQ9NTK1 212 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 ARL15Q9NXU5 204 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 ZFATQ9P243 1243 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 TNFRSF10DQ9UBN6 386 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 COMMD10Q9Y6G5 202 aa13.15□□□□□ -0.3
SLIRP-210ENST00000557431 IGKV3D-11A0A0A0MRZ8 115 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 TCRBV16S1A1N1A0A5B0 115 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 FAM166BA8MTA8 275 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 GOLGA6L6A8MZA4 724 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 EIF3FO00303 357 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 ITGA10O75578 1167 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 MYO1DO94832 1006 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 MLNP12872 115 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 SCTRP47872 440 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 NUP107P57740 925 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 REEP5Q00765 189 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 RGS1Q08116 209 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 SP140Q13342 867 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 CRYMQ14894 314 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 RBBP5Q15291 538 aaKnown RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 C18orf21Q32NC0 220 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 EMC4Q5J8M3 183 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 SPNS3Q6ZMD2 512 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 NAT8LQ8N9F0 302 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 APCDD1LQ8NCL9 501 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 OR4K1Q8NGD4 311 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 NT5CQ8TCD5 201 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 CALML6Q8TD86 181 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 SLC5A11Q8WWX8 675 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 TREX2Q9BQ50 279 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 HAUS8Q9BT25 410 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 FAM167BQ9BTA0 163 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 TRIM45Q9H8W5 580 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 TAS2R13Q9NYV9 303 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 KCMF1Q9P0J7 381 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 KLF13Q9Y2Y9 288 aaPredicted RBP13.14□□□□□ -0.31
SLIRP-210ENST00000557431 LIPGQ9Y5X9 500 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 EXPH5Q8NEV8 1989 aa13.14□□□□□ -0.31
SLIRP-210ENST00000557431 MTORP42345 2549 aa13.13□□□□□ -0.31
SLIRP-210ENST00000557431 MAGEB16A2A368 324 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms