RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 HPRP00739 348 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 IL1R1P14778 569 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FMO1Q01740 532 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MEF2DQ14814 521 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ARHGAP19Q14CB8 494 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MS4A15Q8N5U1 240 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FNDC8Q8TC99 324 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 C7orf34Q96L11 122 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 B4GALT7Q9UBV7 327 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MRPS23Q9Y3D9 190 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 A0A1W2PPW3 197 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 PRAMEF2O60811 474 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ESCO2Q56NI9 601 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF641Q96N77 438 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 CASD1Q96PB1 797 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GPN2Q9H9Y4 310 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 NOTCH3Q9UM47 2321 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 F5P12259 2224 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 A6NHS1 94 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 NFATC1O95644 943 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 XRCC1P18887 633 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 PLA2G15Q8NCC3 412 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GALNT11Q8NCW6 608 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FN3KRPQ9HA64 309 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GPATCH2LQ9NWQ4 482 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GJE1A6NN92 205 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TOX4O94842 621 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 HDCP19113 662 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ADORA2AP29274 412 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 LTKP29376 864 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 FMO3P31513 532 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 SCNN1AP37088 669 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ZNF92Q03936 586 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MON1BQ7L1V2 547 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 CD163Q86VB7 1156 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 OPA3Q9H6K4 179 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 GLOD4Q9HC38 313 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 MS4A12Q9NXJ0 267 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 PCDHB14Q9Y5E9 798 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 APODP05090 189 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
SYNE3-205ENST00000557275 RHDQ02161 417 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 CLIP4Q8N3C7 705 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 ABCA6Q8N139 1617 aa8.57□□□□□ -1.04
SYNE3-205ENST00000557275 H7C1Q1 480 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RHOP08100 348 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PAOXQ6QHF9 649 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 KIAA1324Q6UXG2 1013 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OR2T33Q8NG76 320 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ISOC1Q96CN7 298 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ACTL8Q9H568 366 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RPS10P5Q9NQ39 176 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NUP205Q92621 2012 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OR6C75A6NL08 312 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 F6UZH7 168 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RGL2O15211 777 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 VEGFDO43915 354 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 UBBP0CG47 229 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 UBCP0CG48 685 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ALKBH2Q6NS38 261 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ALPK1Q96QP1 1244 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 ZBTB48P10074 688 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 RAB7AP51149 207 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NCBP2P52298 156 aaKnown RBP eCLIP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PPP4CP60510 307 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 LRP8Q14114 963 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PLD6Q8N2A8 252 aaKnown RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 OR9A4Q8NGU2 314 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PRRT1Q99946 306 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PLCXD1Q9NUJ7 323 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 JCADQ9P266 1359 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 FAM149AA5PLN7 773 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NEDD8-MDP1E9PL57 170 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CSF1P09603 554 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 STAG3L2P0CL84 134 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 GNSP15586 552 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PTPRAP18433 802 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 MC2RQ01718 297 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 PTP4A2Q12974 167 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SF3B4Q15427 424 aaKnown RBP eCLIP8.56□□□□□ -1.042e-7■■□□□ 14.1
SYNE3-205ENST00000557275 KCT2Q8NC54 265 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 MINDY3Q9H8M7 445 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 FAIMQ9NVQ4 179 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 MOXD2PA6NHM9 499 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CAPN5O15484 640 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 VTNP04004 478 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CSNK2A2P19784 350 aaPredicted RBP8.56□□□□□ -1.04
SYNE3-205ENST00000557275 DSTNP60981 165 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 FAM69AQ5T7M9 428 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 GDPGP1Q6ZNW5 385 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 TMPPEQ6ZT21 453 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 NRROSQ86YC3 692 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 FANK1Q8TC84 345 aa8.56□□□□□ -1.04
SYNE3-205ENST00000557275 SLC35A5Q9BS91 424 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms